Code

adding sssom support#109

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glass-ships merged 20 commits intomainmonarch-initiative/koza:mainfrom developmonarch-initiative/koza:developCopy head branch name to clipboardOct 24, 2023

+2,265-2,010

Commits

Commits on May 22, 2023

• adding sssom support

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Commits on May 25, 2023

• initial implementation, lots of ifs and df lookups

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• move sssom logic to its dataclass in source config

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Commits on May 26, 2023

• add sssom columns to edge properties if config

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Commits on Jun 1, 2023

• update docs, filter_prefixes optional

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Commits on Jun 2, 2023

• some docs updates, revert sssom from fork

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Commits on Jun 6, 2023

• add testing and implement sssom in jsonl writer

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• update docstring for sssomconfig

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• revert gitignore, still need to do narrow and broad match tests

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Commits on Sep 1, 2023

• try fix for more fix for issue#110

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Commits on Sep 4, 2023

• sssom test now failing, no idea why

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Commits on Sep 6, 2023

• revert SSSOM to 0.3.31

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• Fix github error

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Commits on Oct 23, 2023

• un-implement narrow/broad match

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Commits on Oct 24, 2023

• fix exact match in both directions

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• move sssom config to its own file, add match enum and config

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• "do something else" (good enough for now)

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• add ruff, run formatting

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• comment out validator test for now

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• update workflow

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