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@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

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  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 239 54

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 48 4

  3. MAxO MAxO Public

    Medical action ontology

    HTML 55 4

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 16 3

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Python 19 6

Repositories

Showing 10 of 244 repositories
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 239 CC-BY-4.0 54 425 (3 issues need help) 41 Updated Jan 29, 2025
  • vertebrate-breed-ontology Public
    monarch-initiative/vertebrate-breed-ontology’s past year of commit activity
    Makefile 12 1 44 4 Updated Jan 29, 2025
  • emods Public

    Monarch and Linda Crrnic Center project on phenotype identification

    monarch-initiative/emods’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 29, 2025
  • zfin-genotype-to-phenotype-ingest Public
    monarch-initiative/zfin-genotype-to-phenotype-ingest’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 29, 2025
  • oncopacket Public

    A package to convert cancer data to GA4GH phenopacket

    monarch-initiative/oncopacket’s past year of commit activity
    Jupyter Notebook 7 MIT 1 22 4 Updated Jan 28, 2025
  • monarch-app Public

    Monarch Initiative website and API

    monarch-initiative/monarch-app’s past year of commit activity
    Python 19 BSD-3-Clause 6 188 (3 issues need help) 9 Updated Jan 28, 2025
  • gpsea Public

    A Python library for discovery of genotype-phenotype associations

    monarch-initiative/gpsea’s past year of commit activity
    Python 5 MIT 1 14 0 Updated Jan 28, 2025
  • kghub-downloader Public

    Configuration based file caching downloader

    monarch-initiative/kghub-downloader’s past year of commit activity
    Python 6 0 4 2 Updated Jan 27, 2025
  • monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    monarch-initiative/monarch-ingest’s past year of commit activity
    Python 16 3 34 3 Updated Jan 27, 2025
  • medgen Public

    MedGen ingest.

    monarch-initiative/medgen’s past year of commit activity
    Python 2 0 9 0 Updated Jan 26, 2025
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