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collate‐annotations

Santiago Castro Dau edited this page Apr 22, 2024 · 3 revisions

Takes a collection of FeatureData[NOG]s and collates them into a single artifact.

For the full description of the action's inputs, outputs, and parameters run qiime moshpit collate‐annotations --help in the terminal.

Inputs

  • ortholog_annotations (List[FeatureData[NOG]): Collection of ortholog annotations. Must be a folder with nothing but FeatureData[NOG] artifacts.

Outputs

Example Use

qiime moshpit collate‐annotations \
   --i-mags annotations \ # folder with FeatureData[NOG] artifacts
   --o-partitioned_mags collated_annotations.qza \
   --verbose

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