Predict Genes from MAGs

Once you have an qiime artifact containing you MAGs (e.g. mags.qza) you can use the predict-genes-prodigal action from q2-moshpit to predict genes from your MAGs.

You can find out more about how to generate a mags.qza artifact in the Generate MAGs from Reads tutorial

Estimated runtime: less than a minute

qiime moshpit predict-genes-prodigal \
    --i-mags mags.qza \ 
    --o-loci loci.qza \ 
    --o-proteins proteins.qza \
    --o-genes genes.qza