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v0.2-beta
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@shajoezhu shajoezhu released this 04 Aug 21:54
· 748 commits to master since this release
v0.2-beta
baf3286

Major changes and improvements:

  • Program, repo names changed to DEploid
  • Support for reading in VCF, and output in VCF
  • Print out posterior probabilities at the final iteration, which allows us to do "painting" to the reference panel
  • Record starting and end times
  • Support debug temp files to record position when recomb or miscopying occur

Bug fixed:

  • position output should be an integer rather than a double
  • when updating haplotypes, the probability index was wrong
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