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GAIN: A graphical method to automatically analyze individual neurite outgrowth

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Image Combiner
Image Combiner
 
 
Box.m
Box.m
 
 
EdgeInfo.m
EdgeInfo.m
 
 
GAIN_Instructions.pdf
GAIN_Instructions.pdf
 
 
GUI_Instructions.pdf
GUI_Instructions.pdf
 
 
ImageHandle.m
ImageHandle.m
 
 
LICENSE.md
LICENSE.md
 
 
MaskHandle.m
MaskHandle.m
 
 
NIPState.m
NIPState.m
 
 
NeuriteGraph.m
NeuriteGraph.m
 
 
NeuronBodyData.m
NeuronBodyData.m
 
 
NeuronGUI.m
NeuronGUI.m
 
 
NeuronImageProcessor.m
NeuronImageProcessor.m
 
 
NewNeuriteGraph.m
NewNeuriteGraph.m
 
 
Node.m
Node.m
 
 
NucleusData.m
NucleusData.m
 
 
NumericParameters.m
NumericParameters.m
 
 
NumericSubtype.m
NumericSubtype.m
 
 
OneParameter.m
OneParameter.m
 
 
Parameters.m
Parameters.m
 
 
Path.m
Path.m
 
 
README.md
README.md
 
 
Stack.m
Stack.m
 
 
Tree.m
Tree.m
 
 
addBorder.m
addBorder.m
 
 
computeLongPaths.m
computeLongPaths.m
 
 
createControlPanel.m
createControlPanel.m
 
 
createDataTable.m
createDataTable.m
 
 
createDir.m
createDir.m
 
 
createEditBox.m
createEditBox.m
 
 
createFigure.m
createFigure.m
 
 
createFigure1.m
createFigure1.m
 
 
createFigure2.m
createFigure2.m
 
 
createFigure3.m
createFigure3.m
 
 
createFigure8.m
createFigure8.m
 
 
createFigure9.m
createFigure9.m
 
 
createGraph.m
createGraph.m
 
 
createImagePair.m
createImagePair.m
 
 
createIntermediateImages.m
createIntermediateImages.m
 
 
createSlider.m
createSlider.m
 
 
createTemplate.m
createTemplate.m
 
 
displaySegmentation.m
displaySegmentation.m
 
 
errorFigure.m
errorFigure.m
 
 
extendNeuritesNew.m
extendNeuritesNew.m
 
 
findEdges.m
findEdges.m
 
 
findEdges2.m
findEdges2.m
 
 
findjobj.m
findjobj.m
 
 
get_image.m
get_image.m
 
 
isSideAdjacent.m
isSideAdjacent.m
 
 
letterLabel.m
letterLabel.m
 
 
multithresholdComparison.m
multithresholdComparison.m
 
 
myfmincon.m
myfmincon.m
 
 
myfminsearch.m
myfminsearch.m
 
 
myfminunc.m
myfminunc.m
 
 
myfsolve.m
myfsolve.m
 
 
mylsqnonlin.m
mylsqnonlin.m
 
 
mystrcmp.m
mystrcmp.m
 
 
neuriteTracerComparison.m
neuriteTracerComparison.m
 
 
nextActionString.m
nextActionString.m
 
 
nucleusSegmentationExample.m
nucleusSegmentationExample.m
 
 
overLayText.m
overLayText.m
 
 
processCellBodies.m
processCellBodies.m
 
 
processImage.m
processImage.m
 
 
readAsGray.m
readAsGray.m
 
 
segmentationError.m
segmentationError.m
 
 
skeletonize3.m
skeletonize3.m
 
 
strBinarySearch.m
strBinarySearch.m
 
 
stripComment.m
stripComment.m
 
 
tabulateError.m
tabulateError.m
 
 
temp.m
temp.m
 
 
temp2.m
temp2.m
 
 
temp3.m
temp3.m
 
 
templates.tif
templates.tif
 
 
thresholdComparison.m
thresholdComparison.m
 
 
timing.m
timing.m
 
 
trimDecimal.m
trimDecimal.m
 
 
updateControlPanel.m
updateControlPanel.m
 
 
writeOutput.m
writeOutput.m
 
 

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GAIN

GAIN: A Graph-Based Method to Automatically Analyze Neurite Outgrowth in Cell Cultures

Added edge detection with two thresholding operations.

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GAIN: A graphical method to automatically analyze individual neurite outgrowth

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