-
Notifications
You must be signed in to change notification settings - Fork 1
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge pull request #3 from parmsam/sam-dev
Ensure C++11 through C++20 compatibility
- Loading branch information
Showing
12 changed files
with
422 additions
and
88 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,50 +1,229 @@ | ||
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
on: | ||
push: | ||
branches: [main, master] | ||
pull_request: | ||
branches: [main, master] | ||
workflow_call: | ||
inputs: | ||
extra-packages: | ||
type: string | ||
default: "" | ||
required: false | ||
cache-version: | ||
type: string | ||
default: "2" | ||
required: false | ||
pandoc-version: | ||
type: string | ||
default: "3.x" | ||
required: false | ||
extra-check-args: | ||
type: string | ||
# default: '"--run-donttest", "--no-manual", "--as-cran"' | ||
default: "NULL" | ||
required: false | ||
macOS: | ||
type: string | ||
default: "macOS-latest" | ||
required: false | ||
windows: | ||
type: string | ||
default: "windows-latest" | ||
required: false | ||
ubuntu: | ||
type: string | ||
required: false | ||
# To test more versions, they must be separated by a space. Ex: `"ubuntu-18.04 ubuntu-20.04` | ||
default: "ubuntu-20.04" | ||
minimum-r-version: | ||
type: string | ||
required: false | ||
default: "" | ||
force-windows-src: | ||
type: boolean | ||
required: false | ||
default: false | ||
rtools-35: | ||
type: boolean | ||
default: true | ||
required: false | ||
rtools-40: | ||
type: boolean | ||
default: true | ||
required: false | ||
|
||
name: R-CMD-check | ||
|
||
jobs: | ||
setup: | ||
name: setup | ||
runs-on: ubuntu-latest | ||
outputs: | ||
config: ${{ steps.config.outputs.config }} | ||
steps: | ||
# - name: devel | ||
# id: devel | ||
# uses: r-lib/actions/setup-r@v2 | ||
# with: | ||
# r-version: devel | ||
# install-r: false | ||
|
||
- name: release | ||
id: release | ||
uses: r-lib/actions/setup-r@v2 | ||
with: | ||
r-version: release | ||
install-r: false | ||
|
||
- name: oldrel-1 | ||
id: oldrel-1 | ||
uses: r-lib/actions/setup-r@v2 | ||
with: | ||
r-version: oldrel-1 | ||
install-r: false | ||
|
||
- name: oldrel-2 | ||
id: oldrel-2 | ||
uses: r-lib/actions/setup-r@v2 | ||
with: | ||
r-version: oldrel-2 | ||
install-r: false | ||
|
||
- name: oldrel-3 | ||
id: oldrel-3 | ||
uses: r-lib/actions/setup-r@v2 | ||
with: | ||
r-version: oldrel-3 | ||
install-r: false | ||
|
||
- name: oldrel-4 | ||
id: oldrel-4 | ||
uses: r-lib/actions/setup-r@v2 | ||
with: | ||
r-version: oldrel-4 | ||
install-r: false | ||
|
||
- name: Checkout GitHub repo | ||
uses: rstudio/shiny-workflows/.github/internal/checkout@v1 | ||
|
||
# R is a pre-installed software | ||
- name: Config | ||
id: config | ||
shell: Rscript {0} | ||
run: | | ||
mac <- "${{ inputs.macOS }}" | ||
windows <- "${{ inputs.windows }}" | ||
ubuntu <- strsplit("${{ inputs.ubuntu }}", "[[:space:],]+")[[1]] | ||
has_src <- dir.exists("src") | ||
min_r_ver <- "${{ inputs.minimum-r-version }}" | ||
test_on_rtools35 <- identical("${{ inputs.rtools-35 }}", "true") | ||
test_on_rtools40 <- identical("${{ inputs.rtools-40 }}", "true") | ||
force_windows_src <- identical("${{ inputs.force-windows-src }}", "true") | ||
if (force_windows_src) has_src <- TRUE | ||
rver <- list( | ||
# devel = "${{ steps.devel.outputs.installed-r-version }}", | ||
# When R 4.3 was released, R version 4.4.0 was not recognized. | ||
# However, `"devel"` is recognized within `r-lib/actions/setup-r`. | ||
devel = "devel", | ||
release = "${{ steps.release.outputs.installed-r-version }}", | ||
oldrel1 = "${{ steps.oldrel-1.outputs.installed-r-version }}", | ||
oldrel2 = "${{ steps.oldrel-2.outputs.installed-r-version }}", | ||
oldrel3 = "${{ steps.oldrel-3.outputs.installed-r-version }}", | ||
oldrel4 = "${{ steps.oldrel-4.outputs.installed-r-version }}" | ||
) | ||
job <- function(os, r, ...) { | ||
list(os = os, r = r, ...) | ||
} | ||
is_valid_os <- function(os, r_ver = "") { | ||
if (identical(os, "false")) return(FALSE) | ||
if (identical(os, "")) return(FALSE) | ||
if (any(nchar(c(r_ver, min_r_ver)) == 0)) return(TRUE) | ||
if (identical(r_ver, "devel")) return(TRUE) | ||
r_ver >= min_r_ver | ||
} | ||
config <- c( | ||
list( | ||
if (is_valid_os(mac, rver$release)) job(mac, rver$release), | ||
if (has_src && is_valid_os(windows, "devel")) job(windows, "devel", "rtools-version" = "44"), | ||
if (is_valid_os(windows, rver$release)) job(windows, rver$release, "rtools-version" = "43"), | ||
if (has_src && is_valid_os(windows, "4.2")) job(windows, "4.2", "rtools-version" = "42"), | ||
if (has_src && test_on_rtools40 && is_valid_os(windows, "4.1")) job(windows, "4.1"), | ||
if (has_src && test_on_rtools35 && is_valid_os(windows, "3.6")) job(windows, "3.6"), | ||
if (is_valid_os(ubuntu, rver$devel)) job(ubuntu[[1]], rver$devel, "http-user-agent" = "release") | ||
), | ||
if (is_valid_os(ubuntu)) | ||
unlist(recursive = FALSE, lapply(ubuntu, function(ubuntu_) { | ||
list( | ||
if (is_valid_os(ubuntu_, rver$release)) job(ubuntu_, rver$release), | ||
if (is_valid_os(ubuntu_, rver$oldrel1)) job(ubuntu_, rver$oldrel1), | ||
if (is_valid_os(ubuntu_, rver$oldrel2)) job(ubuntu_, rver$oldrel2), | ||
if (is_valid_os(ubuntu_, rver$oldrel3)) job(ubuntu_, rver$oldrel3), | ||
if (is_valid_os(ubuntu_, rver$oldrel4)) job(ubuntu_, rver$oldrel4) | ||
) | ||
})) | ||
) | ||
## Drop NULLs | ||
config <- config[!vapply(config, is.null, logical(1))] | ||
## Convert to JSON manually to save 10s installing `jsonlite` | ||
join_and_wrap <- function(x, start, end, sep = ",") { | ||
paste0(start, paste0(x, collapse = sep), end) | ||
} | ||
entries_json <- vapply(config, character(1), FUN = function(entry) { | ||
join_and_wrap( | ||
paste0("\"", names(entry), "\":\"", unname(entry), "\""), | ||
"{", "}" | ||
) | ||
}) | ||
config_json <- join_and_wrap(entries_json, "[", "]") | ||
cat("Config:\n", config_json, "\n", sep = "") | ||
cat("config=", config_json, "\n", file = Sys.getenv("GITHUB_OUTPUT"), sep = "", append = TRUE) | ||
R-CMD-check: | ||
runs-on: ${{ matrix.config.os }} | ||
|
||
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
|
||
needs: [setup] | ||
strategy: | ||
fail-fast: false | ||
matrix: | ||
config: | ||
- {os: macos-latest, r: 'release'} | ||
- {os: windows-latest, r: 'release'} | ||
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | ||
- {os: ubuntu-latest, r: 'release'} | ||
- {os: ubuntu-latest, r: 'oldrel-1'} | ||
config: ${{ fromJSON(needs.setup.outputs.config) }} | ||
|
||
env: | ||
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
R_KEEP_PKG_SOURCE: yes | ||
|
||
steps: | ||
- uses: actions/checkout@v4 | ||
|
||
- uses: r-lib/actions/setup-pandoc@v2 | ||
- name: Checkout GitHub repo | ||
uses: rstudio/shiny-workflows/.github/internal/checkout@v1 | ||
|
||
- uses: r-lib/actions/setup-r@v2 | ||
- name: Install R, system dependencies, and package dependencies | ||
uses: rstudio/shiny-workflows/setup-r-package@v1 | ||
with: | ||
rtools-version: ${{ matrix.config.rtools-version }} | ||
pandoc-version: ${{ inputs.pandoc-version }} | ||
r-version: ${{ matrix.config.r }} | ||
http-user-agent: ${{ matrix.config.http-user-agent }} | ||
use-public-rspm: true | ||
cache-version: ${{ inputs.cache-version }} | ||
needs: check | ||
extra-packages: | | ||
any::rcmdcheck | ||
${{ inputs.extra-packages }} | ||
- uses: r-lib/actions/setup-r-dependencies@v2 | ||
- name: Check package | ||
uses: r-lib/actions/check-r-package@v2 | ||
timeout-minutes: 30 | ||
with: | ||
extra-packages: any::rcmdcheck | ||
needs: check | ||
check-dir: '"check"' # matches directory below | ||
args: 'c(${{ inputs.extra-check-args }}, "--no-manual", "--as-cran")' | ||
|
||
- uses: r-lib/actions/check-r-package@v2 | ||
- name: "Show `testthat` output" | ||
if: always() | ||
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | ||
shell: bash | ||
- name: "Show install logs" | ||
if: always() | ||
run: find check -name '00install.out' -exec cat '{}' \; || true | ||
shell: bash | ||
- name: "Upload 'Check package' results" | ||
if: failure() | ||
uses: actions/upload-artifact@main | ||
with: | ||
upload-snapshots: true | ||
build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")' | ||
name: ${{ matrix.config.os }}-r${{ matrix.config.r }}-results | ||
path: "check" |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,17 +1,17 @@ | ||
# Generated by cpp11: do not edit by hand | ||
|
||
compressToEncodedURIComponent_ <- function(uncompressed8) { | ||
.Call(`_lzstringr_compressToEncodedURIComponent_`, uncompressed8) | ||
compressToEncodedURIComponent_ <- function(bytes) { | ||
.Call(`_lzstringr_compressToEncodedURIComponent_`, bytes) | ||
} | ||
|
||
decompressFromEncodedURIComponent_ <- function(compressed8) { | ||
.Call(`_lzstringr_decompressFromEncodedURIComponent_`, compressed8) | ||
decompressFromEncodedURIComponent_ <- function(bytes) { | ||
.Call(`_lzstringr_decompressFromEncodedURIComponent_`, bytes) | ||
} | ||
|
||
compressToBase64_ <- function(uncompressed8) { | ||
.Call(`_lzstringr_compressToBase64_`, uncompressed8) | ||
compressToBase64_ <- function(bytes) { | ||
.Call(`_lzstringr_compressToBase64_`, bytes) | ||
} | ||
|
||
decompressFromBase64_ <- function(compressed8) { | ||
.Call(`_lzstringr_decompressFromBase64_`, compressed8) | ||
decompressFromBase64_ <- function(bytes) { | ||
.Call(`_lzstringr_decompressFromBase64_`, bytes) | ||
} |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Oops, something went wrong.