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removing domain and range restrictions from RO import, as these cause…
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… inferences to CARO classes which pollute downstream artefacts. Issue #422
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cmungall committed Apr 23, 2014
1 parent 96c61fd commit 52e4deb
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion Makefile
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Expand Up @@ -58,7 +58,7 @@ ro.owl: $(EDITSRC) bspo.owl

ro_import.owl: ro.owl $(EDITSRC)
## owltools --use-catalog --map-ontology-iri $(IMP)/$@ $< $(EDITSRC) --extract-module -s $(OBO)/$< -c --remove-annotation-assertions -l -d --add-obo-shorthand-to-properties --set-ontology-id $(OBO)/uberon/ro_import.owl --add-ontology-annotation $(DCE)/title "Relations Ontology Module for Uberon" -o -f ofn $@
owltools --use-catalog $< --remove-axioms --remove-annotation-assertions -l -d -r uberon.owl --extract-properties --set-ontology-id $(OBO)/uberon/$@ --add-ontology-annotation $(DCE)/title "Relations Ontology Module for Uberon" -o $@
owltools --use-catalog $< --remove-axioms -t ObjectPropertyDomain --remove-axioms -t ObjectPropertyRange -t Domain --remove-annotation-assertions -l -d -r uberon.owl --extract-properties --set-ontology-id $(OBO)/uberon/$@ --add-ontology-annotation $(DCE)/title "Relations Ontology Module for Uberon" -o $@

pato.owl: $(EDITSRC)
owltools $(OBO)/$@ --extract-mingraph --make-subset-by-properties BFO:0000050 // --set-ontology-id $(OBO)/$@ -o $@
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