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cmungall committed Apr 23, 2014
1 parent 03ab2f4 commit 96c61fd
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -520,8 +520,8 @@ METAZOAN_OBOS = $(patsubst %,local-%.obo,$(METAZOAN_ONTS))
METAZOAN_BRIDGES = $(patsubst %,bridge/uberon-bridge-to-%.owl,$(METAZOAN_ONTS))
local-%.obo: merged.obo
wget $(OBO)/$*.owl -O cached-$*.owl && owltools cached-$*.owl --repair-relations -o -f obo $@.tmp && egrep -v '^(disjoint|domain|range)' $@.tmp | perl -npe 's/default-namespace: FlyBase development CV/default-namespace: fbdv/' > $@
local-%.owl:
owltools $(OBO)/$*.owl --repair-relations --rename-entity $(OBO)/$*#develops_in $(OBO)/RO_0002203 --rename-entity $(OBO)/$*#develops_from $(OBO)/RO_0002202 --rename-entity $(OBO)/$*#preceded_by $(OBO)/RO_0002087 --rename-entity $(OBO)/$*#connected_to $(OBO)/UBREL_0000001 --remove-axioms -t DisjointClasses --remove-axioms -t ObjectPropertyRange --remove-axioms -t ObjectPropertyDomain -o -f ofn $@
local-%.owl:
owltools $(OBO)/$*.owl --repair-relations --rename-entity $(OBO)/$*#develops_in $(OBO)/RO_0002203 --rename-entity $(OBO)/$*#develops_from $(OBO)/RO_0002202 --rename-entity $(OBO)/$*#preceded_by $(OBO)/RO_0002087 --rename-entity $(OBO)/$*#connected_to $(OBO)/RO_0002170 --remove-axioms -t DisjointClasses --remove-axioms -t ObjectPropertyRange --remove-axioms -t ObjectPropertyDomain -o -f ofn $@

local-NIF_GrossAnatomy.obo: merged.obo
wget http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-GrossAnatomy.owl -O cached-$@.owl && perl -pi -ne 's@http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-GrossAnatomy.owl#@$(OBO)/NIF_GrossAnatomy_@g' cached-$@.owl && owltools cached-$@.owl -o -f obo $@
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