cs267 hw3
Nuochen Lyu Xiaoyun Zhao
Login to cori or any super computer center
Configuration source module.sh
Compile make
Request Node from Cori salloc -N 1 -A mp309 -t 60:00 -q debug --qos=interactive -C haswell
Run with your DNA Data srun -N 1 -n 32 ./kmer_hash /global/project/projectdirs/mp309/cs267-spr2018/hw3-datasets/test.txt
Or source mybenmark.sh
change environment variable for large dataset: export GASNET_MAX_SEGSIZE=5000MB/H export UPCXX_SEGMENT_MB=5000
