job-kmer-51

#!/bin/bash -l
#SBATCH -C haswell
#SBATCH -p debug      # change this option for non-debug runs
#SBATCH -N 32         # you'll never need more than 1 node for the serial code
#SBATCH -t 00:30:00   # adjust the amount of time as necessary
#SBATCH -J kmer51 
#SBATCH -o kmer51.%j.stdout
#SBATCH -e kmer51.%j.error

export GASNET_MAX_SEGSIZE=5000MB/H 
export UPCXX_SEGMENT_MB=5000

#srun -N 1 -n 32 ./kmer_hash /global/project/projectdirs/mp309/cs267-spr2018/hw3-datasets/large.txt

#srun -N 2 -n 64 ./kmer_hash /global/project/projectdirs/mp309/cs267-spr2018/hw3-datasets/large.txt

#srun -N 4 -n 128 ./kmer_hash /global/project/projectdirs/mp309/cs267-spr2018/hw3-datasets/large.txt

#srun -N 8 -n 256 ./kmer_hash /global/project/projectdirs/mp309/cs267-spr2018/hw3-datasets/large.txt

#srun -N 1 -n 32 ./kmer_hash /global/project/projectdirs/mp309/cs267-spr2018/hw3-datasets/human-chr14-synthetic.txt

#srun -N 2 -n 64 ./kmer_hash /global/project/projectdirs/mp309/cs267-spr2018/hw3-datasets/human-chr14-synthetic.txt

#srun -N 4 -n 128 ./kmer_hash /global/project/projectdirs/mp309/cs267-spr2018/hw3-datasets/human-chr14-synthetic.txt

srun -N 8 -n 256 ./kmer_hash /global/project/projectdirs/mp309/cs267-spr2018/hw3-datasets/human-chr14-synthetic.txt