Merge pull request #103 from kbase/dev_jupyterhub

update dep

Pipfile

@@ -5,48 +5,49 @@ name = "pypi"
 
 [packages]
 jupyterlab= "==4.2.5"
-jupyterhub = "==5.1.0"
-jupyterhub-nativeauthenticator = "==1.2.0"
+jupyterhub = "==5.2.0"
+jupyterhub-nativeauthenticator = "==1.3.0"
 dockerspawner = "==13.0.0"
 jupyterlab_favorites = "==3.2.2"
+sidecar = "==0.7.0"
 json5 = "==0.9.25"
 pycurl = "==7.45.3"
-pyspark= "==3.5.2"
-boto3 = "==1.35.16"
-minio = "==7.2.8"
+pyspark= "==3.5.3"
+boto3 = "==1.35.35"
+minio = "==7.2.9"
 delta-spark = "==3.2.0"  # should match JAR version (DELTA_SPARK_VER) specified in the Dockerfile
-pandas = "==2.2.2"
+pandas = "==2.2.3"
 pyarrow = "==17.0.0"
-itables = "==2.1.5"
+itables = "==2.2.2"
 PyMySQL = "==1.1.1"
-urllib3 = "==2.2.2"
+urllib3 = "==2.2.3"
 jupyterlab-git = "==0.50.1"
 cdm-jupyterlab-brand-extension = {file = "https://github.com/kbaseincubator/cdm_jupyterlab_brand_extension/raw/main/dist/cdm_jupyterlab_brand_extension-0.1.0-py3-none-any.whl"}
 
 # Frequently utilized scientific libraries by the science team
-plotly = "==5.24.0"
+plotly = "==5.24.1"
 tqdm = "==4.66.5"
 ipywidgets = "==8.1.5"
-pygraphviz = "==1.13"
+pygraphviz = "==1.14"
 catboost = "==1.2.5"
 scipy = "==1.14.1"
 scikit-learn = "==1.5.1"
 biopython = "==1.84"
 seaborn = "==0.13.2"
 geopandas = "==1.0.1"
 contextily = "==1.6.2"
-dill = "==0.3.8"
+dill = "==0.3.9"
 folium = "==0.17.0"
 geopy = "==2.4.1"
-pygeohydro = "==0.17.0"
-pynhd = "==0.17.0"
-numpy = "==2.1.1"
+pygeohydro = "==0.18.0"
+pynhd = "==0.18.0"
+numpy = "==2.1.2"
 
 [dev-packages]
 pytest = "==8.3.3"
 coverage = "==7.6.1"
 pytest-cov = "==5.0.0"
-ipython = "==8.27.0"
+ipython = "==8.28.0"
 
 [requires]
 python_version = "3.11"