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Kantor Lab

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  1. hivmmer hivmmer Public

    Alignment and variant-calling pipeline for Illumina HIV sequences.

    Python 11 3

  2. hiv-measurement-error hiv-measurement-error Public

    Testbed for alignment and variant-calling of Illumina HIV sequences.

    Python 1

  3. conda-recipes conda-recipes Public

    Shell

  4. primer-id-5vm primer-id-5vm Public

    Intermediate results reproduced from "A Comprehensive Analysis of Primer IDs to Study Heterogeneous HIV-1 Populations"

    Shell

  5. hiv-profile-sampling hiv-profile-sampling Public

    Incorporating within-host diversity in phylogenetic analyses for detecting clusters of new HIV diagnoses.

    Perl

  6. covid-pipeline covid-pipeline Public

    Shell 2

Repositories

Showing 7 of 7 repositories
  • hiv-real-time-phylogeny Public

    Automated bioformatics pipeline for near-real-time public-health responses to new HIV diagnoses

    kantorlab/hiv-real-time-phylogeny’s past year of commit activity
    Python 0 0 0 0 Updated Nov 12, 2022
  • covid-pipeline Public
    kantorlab/covid-pipeline’s past year of commit activity
    Shell 0 2 0 0 Updated Jun 10, 2022
  • hiv-profile-sampling Public

    Incorporating within-host diversity in phylogenetic analyses for detecting clusters of new HIV diagnoses.

    kantorlab/hiv-profile-sampling’s past year of commit activity
    Perl 0 0 0 0 Updated Jan 11, 2022
  • conda-recipes Public
    kantorlab/conda-recipes’s past year of commit activity
    Shell 0 0 0 0 Updated Sep 17, 2020
  • hivmmer Public

    Alignment and variant-calling pipeline for Illumina HIV sequences.

    kantorlab/hivmmer’s past year of commit activity
    Python 11 3 8 0 Updated May 19, 2020
  • hiv-measurement-error Public

    Testbed for alignment and variant-calling of Illumina HIV sequences.

    kantorlab/hiv-measurement-error’s past year of commit activity
    Python 1 0 0 0 Updated Oct 19, 2019
  • primer-id-5vm Public

    Intermediate results reproduced from "A Comprehensive Analysis of Primer IDs to Study Heterogeneous HIV-1 Populations"

    kantorlab/primer-id-5vm’s past year of commit activity
    Shell 0 0 0 0 Updated Jul 13, 2018

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