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fixes error in adverse events when ASTDY is of difftime type #1284

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merged 2 commits into from
Dec 5, 2024
Merged

fixes error in adverse events when ASTDY is of difftime type #1284

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7b3bc78
fix: convert difftime columns to compatible format in rlistings
averissimo Dec 5, 2024
fce5e03
chore: cleanup
averissimo Dec 5, 2024
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8 changes: 6 additions & 2 deletions R/tm_g_pp_adverse_events.R
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Original file line number Diff line number Diff line change
Expand Up @@ -52,8 +52,12 @@ template_adverse_events <- function(dataname = "ANL",
aeterm, tox_grade, causality, outcome, action, time, decod
) %>%
dplyr::arrange(dplyr::desc(tox_grade)) %>%
`colnames<-`(col_labels(dataname, fill = TRUE)[vars])

`colnames<-`(col_labels(dataname, fill = TRUE)[vars]) %>%
dplyr::mutate( # Exception for columns of type difftime that is not supported by as_listing
dplyr::across(
dplyr::where(~ inherits(., what = "difftime")), ~ as.double(., units = "auto")
)
)
table <- rlistings::as_listing(
table,
key_cols = NULL,
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