Skip to content
/ vcf_ML Public

Binary Classifier. Takes vcf file and corresponding sample disease label as input. Depends on VariantSpark

Notifications You must be signed in to change notification settings

fifdick/vcf_ML

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

31 Commits
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Binary Classifier. Takes vcf file and corresponding sample disease label as input. Depends on VariantSpark (https://github.com/aehrc/VariantSpark) for feature selection. So far only implemented with Spark ML GBT models for predicition of disease status. Spark 2.4.0 Scala 2.11.0

About

Binary Classifier. Takes vcf file and corresponding sample disease label as input. Depends on VariantSpark

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published