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explicitly pull prealignment fasta asset
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jpsmith5 authored Nov 1, 2021
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Expand Up @@ -73,9 +73,10 @@ refgenie pull hg38/fasta hg38/bowtie2_index hg38/refgene_anno hg38/ensembl_gtf h
refgenie build hg38/feat_annotation
```

`PEPATAC` also requires a `bowtie2_index` asset for any pre-alignment genomes:
`PEPATAC` also requires a `fasta` and `bowtie2_index` asset for any pre-alignment genomes:

```console
refgenie pull rCRSd/fasta
refgenie pull rCRSd/bowtie2_index
```

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