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1. databio/pepatac databio/pepatac Public

   A modular, containerized pipeline for ATAC-seq data processing

   R 54 15

2. databio/peppro databio/peppro Public

   A modular, containerized pipeline for PRO-seq data processing

   Python 10 2

3. databio/awesome-atac-analysis databio/awesome-atac-analysis Public

   Links to ATAC-seq analysis tools

   52 6

4. refgenie/refgenie refgenie/refgenie Public

   Reference genome resource manager

   Python 73 10

5. databio/COCOA databio/COCOA Public

   Annotating epigenetic variation among samples with region sets in R

   R 10

6. databio/GenomicDistributions databio/GenomicDistributions Public

   Calculate and plot distributions of genomic ranges

   R 24 10