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Merge pull request #181 from databio/dev
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Dev
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jpsmith5 authored May 19, 2021
2 parents ec7d91f + 7ea1d23 commit 1348557
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2 changes: 1 addition & 1 deletion PEPATACr/DESCRIPTION
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Expand Up @@ -8,4 +8,4 @@ Depends: R (>= 3.5.1), data.table, pepr, gplots, grid, ggplot2, optigrab, scales
License: BSD 2-Clause "Simplified" License
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
RoxygenNote: 7.1.1
1 change: 1 addition & 0 deletions PEPATACr/NAMESPACE
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Expand Up @@ -2,6 +2,7 @@

export(consensusPeaks)
export(createAssetsSummary)
export(createStatsSummary)
export(fileIcon)
export(getPrealignments)
export(narrowPeakToBigBed)
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269 changes: 180 additions & 89 deletions PEPATACr/R/PEPATACr.R

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18 changes: 15 additions & 3 deletions PEPATACr/man/collapsePeaks.Rd

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21 changes: 17 additions & 4 deletions PEPATACr/man/consensusPeaks.Rd

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6 changes: 3 additions & 3 deletions PEPATACr/man/countReproduciblePeaks.Rd

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10 changes: 4 additions & 6 deletions PEPATACr/man/createAssetsSummary.Rd

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16 changes: 16 additions & 0 deletions PEPATACr/man/createStatsSummary.Rd

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14 changes: 14 additions & 0 deletions PEPATACr/man/is.empty.Rd

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25 changes: 22 additions & 3 deletions PEPATACr/man/peakCounts.Rd

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4 changes: 2 additions & 2 deletions PEPATACr/man/reducePeaks.Rd

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17 changes: 17 additions & 0 deletions PEPATACr/man/tryCatchChromBins.Rd

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