Skip to content
This repository has been archived by the owner on Mar 19, 2024. It is now read-only.

Actions: cfe-lab/HIVIntact

Actions

All workflows

Actions

Loading...
Loading

Showing runs from all workflows
226 workflow runs
226 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

Final README.md update Local test #296: Commit dffd07b pushed by Donaim
March 14, 2024 15:37 6m 57s master
master
March 14, 2024 15:37 6m 57s
Final README.md update Local test #295: Commit 63634b8 pushed by Donaim
March 14, 2024 15:33 28s master
master
March 14, 2024 15:33 28s
add --check-unknown-nucleotides flag Local test #294: Commit 5580125 pushed by Donaim
February 16, 2024 17:20 6m 55s master
master
February 16, 2024 17:20 6m 55s
add --check-unknown-nucleotides flag Local test #293: Commit 855918b pushed by Donaim
February 16, 2024 17:19 7m 42s master
master
February 16, 2024 17:19 7m 42s
include final decision into holistic.csv Local test #292: Commit 975a58d pushed by Donaim
February 7, 2024 22:34 7m 7s master
master
February 7, 2024 22:34 7m 7s
tests: add a case with lowercase letters Local test #291: Commit 4c77509 pushed by Donaim
September 27, 2023 21:44 10m 24s master
master
September 27, 2023 21:44 10m 24s
improve reverse decision logic Local test #290: Commit 6e8983a pushed by Donaim
September 27, 2023 18:45 9m 44s master
master
September 27, 2023 18:45 9m 44s
include subtype nucleotides in orfs.json Local test #289: Commit 4cf554d pushed by Donaim
September 27, 2023 18:15 9m 51s master
master
September 27, 2023 18:15 9m 51s
fix nucleotides list in orfs.json Local test #288: Commit 7344242 pushed by Donaim
September 27, 2023 18:04 8m 30s master
master
September 27, 2023 18:04 8m 30s
add subtypes.fasta to the list of output files Local test #287: Commit c4d6804 pushed by Donaim
September 27, 2023 17:24 9m 23s master
master
September 27, 2023 17:24 9m 23s
fix start/end positions edge cases Local test #286: Commit 3e19d46 pushed by Donaim
September 27, 2023 16:19 9m 37s master
master
September 27, 2023 16:19 9m 37s
inline individual sequence analysis Local test #285: Commit 8136533 pushed by Donaim
September 27, 2023 16:11 8m 46s master
master
September 27, 2023 16:11 8m 46s
use aligned_sequence.get_orf where possible Local test #284: Commit baf4bf3 pushed by Donaim
September 27, 2023 15:53 11m 34s master
master
September 27, 2023 15:53 11m 34s
use aligned_sequence.slice where possible Local test #283: Commit f8e578e pushed by Donaim
September 27, 2023 15:49 8m 51s master
master
September 27, 2023 15:49 8m 51s
remove dead code Local test #282: Commit 189e5f9 pushed by Donaim
September 27, 2023 00:48 8m 50s master
master
September 27, 2023 00:48 8m 50s
remove unused logging function Local test #281: Commit 727d024 pushed by Donaim
September 27, 2023 00:47 10m 28s master
master
September 27, 2023 00:47 10m 28s
make sure to not crash on empty input sequences Local test #280: Commit 8830259 pushed by Donaim
September 27, 2023 00:44 9m 39s master
master
September 27, 2023 00:44 9m 39s
test: add small sequences cases Local test #279: Commit d045178 pushed by Donaim
September 27, 2023 00:39 8m 58s master
master
September 27, 2023 00:39 8m 58s
remove dead code Local test #278: Commit b182c3e pushed by Donaim
September 27, 2023 00:36 8m 26s master
master
September 27, 2023 00:36 8m 26s
remove handling of alignment failures Local test #277: Commit 1fe61c6 pushed by Donaim
September 27, 2023 00:30 8m 35s master
master
September 27, 2023 00:30 8m 35s
tests: add more edge cases Local test #276: Commit c7b622b pushed by Donaim
September 27, 2023 00:29 8m 49s master
master
September 27, 2023 00:29 8m 49s
do not include btop into blast.csv Local test #275: Commit 748316c pushed by Donaim
September 27, 2023 00:14 12m 31s master
master
September 27, 2023 00:14 12m 31s
fix HXB2 reference in all.fasta Local test #274: Commit fade519 pushed by Donaim
September 26, 2023 19:44 10m 8s master
master
September 26, 2023 19:44 10m 8s
subtype_alignments: update .nin files Local test #273: Commit fdf1863 pushed by Donaim
September 26, 2023 19:31 8m 26s master
master
September 26, 2023 19:31 8m 26s
test: add run_end_to_end::edgy cases Local test #272: Commit 57afd0b pushed by Donaim
September 26, 2023 19:27 8m 24s master
master
September 26, 2023 19:27 8m 24s