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main: inline cli() call Local test #271: Commit dbc2fd8 pushed by Donaim
September 26, 2023 15:46 10m 17s master
master
September 26, 2023 15:46 10m 17s
replace print by log.info Local test #270: Commit 2915030 pushed by Donaim
September 26, 2023 00:19 8m 39s master
master
September 26, 2023 00:19 8m 39s
make InvalidCodon error more descriptive Local test #269: Commit 2849537 pushed by Donaim
September 25, 2023 22:10 10m 12s master
master
September 25, 2023 22:10 10m 12s
reorganize ORF classes Local test #268: Commit 12cbef1 pushed by Donaim
September 23, 2023 00:02 8m 47s master
master
September 23, 2023 00:02 8m 47s
Use find_orf for ExpectedORF initialization Local test #267: Commit 8e7e2d4 pushed by Donaim
September 22, 2023 23:25 10m 18s master
master
September 22, 2023 23:25 10m 18s
decide whether ORF has a stop codon based on its presense in reference Local test #266: Commit 5d4f7a3 pushed by Donaim
September 22, 2023 23:03 7m 50s master
master
September 22, 2023 23:03 7m 50s
subtract 1 from ORF end position when reading HXB2 coords Local test #265: Commit 8b66e30 pushed by Donaim
September 22, 2023 23:03 8m 2s master
master
September 22, 2023 23:03 8m 2s
factor out reading of HXB2 ORFs Local test #264: Commit 4aa7004 pushed by Donaim
September 22, 2023 23:03 9m 23s master
master
September 22, 2023 23:03 9m 23s
subtract 1 from ORF end position when reading HXB2 coords Local test #263: Commit d57b03b pushed by Donaim
September 22, 2023 22:55 7m 54s master
master
September 22, 2023 22:55 7m 54s
factor out reading of HXB2 ORFs Local test #262: Commit 3b24f43 pushed by Donaim
September 22, 2023 20:58 8m 11s master
master
September 22, 2023 20:58 8m 11s
tests: run separately against HXB2 too Local test #261: Commit c399add pushed by Donaim
September 22, 2023 19:32 9m 44s master
master
September 22, 2023 19:32 9m 44s
pages build and deployment pages-build-deployment #96: by Donaim
September 22, 2023 19:17 1m 5s
September 22, 2023 19:17 1m 5s
check reverse before searching for ORFs Local test #260: Commit cef7223 pushed by Donaim
September 22, 2023 18:59 6m 19s master
master
September 22, 2023 18:59 6m 19s
pages build and deployment pages-build-deployment #95: by Donaim
September 22, 2023 18:59 1m 8s
September 22, 2023 18:59 1m 8s
factor out reading of hbx2 orfs coordinates Local test #259: Commit 7c4eede pushed by Donaim
September 22, 2023 18:44 6m 11s master
master
September 22, 2023 18:44 6m 11s
pages build and deployment pages-build-deployment #94: by Donaim
September 22, 2023 18:44 59s
September 22, 2023 18:44 59s
pages build and deployment pages-build-deployment #93: by Donaim
September 22, 2023 18:40 1m 7s
September 22, 2023 18:40 1m 7s
check reverse before searching for ORFs Local test #258: Commit cef7223 pushed by Donaim
September 22, 2023 18:40 8m 1s master
master
September 22, 2023 18:40 8m 1s
fix off by 1 error in subtyped ORF creation Local test #257: Commit 16ca152 pushed by Donaim
September 22, 2023 18:32 6m 23s master
master
September 22, 2023 18:32 6m 23s
pages build and deployment pages-build-deployment #92: by Donaim
September 22, 2023 18:32 1m 6s
September 22, 2023 18:32 1m 6s
factor out reading of hbx2 orfs coordinates Local test #256: Commit dbdfc81 pushed by Donaim
September 22, 2023 18:31 6m 49s master
master
September 22, 2023 18:31 6m 49s
pages build and deployment pages-build-deployment #91: by Donaim
September 22, 2023 18:31 1m 14s
September 22, 2023 18:31 1m 14s
check reverse before searching for ORFs Local test #255: Commit cef7223 pushed by Donaim
September 22, 2023 18:23 7m 23s master
master
September 22, 2023 18:23 7m 23s
pages build and deployment pages-build-deployment #90: by Donaim
September 22, 2023 18:23 1m 17s
September 22, 2023 18:23 1m 17s
remove dead code Local test #254: Commit 434179a pushed by Donaim
September 22, 2023 18:18 6m 18s master
master
September 22, 2023 18:18 6m 18s