Merge pull request #53 from puja-trivedi/update_workflows_20240529 #41
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| name: Generating Documentation | ||
| on: | ||
| push: | ||
| branches: | ||
| - main | ||
| permissions: | ||
| contents: write | ||
| jobs: | ||
| check_generate_other_formats: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Check if 'generate_other_formats' workflow is running | ||
| id: check_status | ||
| run: | | ||
| generate_workflow_id=$(gh api -X GET /repos/${{ github.repository }}/actions/workflows/generate_other_formats.yaml/runs \ | ||
| --jq '.workflow_runs[] | select(.status == "in_progress") | .id') | ||
| echo "workflow_id=$generate_workflow_id" >> $GITHUB_ENV | ||
| wait_for_generate_other_formats: | ||
| needs: check_generate_other_formats | ||
| runs-on: ubuntu-latest | ||
| if: env.workflow_id != '' | ||
|
Check failure on line 25 in .github/workflows/generate_docs.yaml
|
||
| steps: | ||
| - name: Wait for 'generate_other_formats' to complete | ||
| run: | | ||
| while [[ "$(gh api -X GET /repos/${{ github.repository }}/actions/runs/$generate_workflow_id --jq '.status')" != "completed" ]]; do | ||
| echo "Waiting for generate_other_formats workflow to complete..." | ||
| sleep 30 | ||
| done | ||
| generate: | ||
| needs: [check_generate_other_formats, wait_for_generate_other_formats] | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout this repository | ||
| uses: actions/checkout@v3 | ||
| - name: Set up Python | ||
| uses: actions/setup-python@v4 | ||
| with: | ||
| python-version: 3.9 | ||
| - name: Install the required python packages | ||
| run: python -m pip install .[docs] | ||
| - name: Other installations | ||
| run: | | ||
| sudo apt-get update | ||
| sudo apt-get install -y build-essential git wget curl | ||
| - name: Create local docs | ||
| run: | | ||
| mkdir docs | ||
| cp -r src/docs/* docs/ | ||
| touch docs/.nojekyll | ||
| cp erdiagram-autogen/ansrs.md docs/ansrs.md | ||
| cp erdiagram-autogen/genome_annotation.md docs/genome_annotation.md | ||
| cp erdiagram-autogen/library_generation.md docs/library_generation.md | ||
| gen-doc -d docs linkml-schema/library_generation.yaml | ||
| mv docs/index.md docs/index_library_generation.md | ||
| gen-doc -d docs linkml-schema/ansrs.yaml | ||
| mv docs/index.md docs/index_ansrs.md | ||
| gen-doc -d docs linkml-schema/genome_annotation.yaml | ||
| mv docs/index.md docs/index_genome_annotation.md | ||
| mv docs/index_main.md docs/index.md | ||
| - name: Deploy to GitHub Pages | ||
| run: mkdocs gh-deploy --force | ||
| # name: generating documentation | ||
| # on: | ||
| # push: | ||
| # branches: | ||
| # - main | ||
| # permissions: | ||
| # contents: write | ||
| # jobs: | ||
| # generate: | ||
| # runs-on: ubuntu-latest | ||
| # steps: | ||
| # - name: Checkout this repository | ||
| # uses: actions/checkout@v3 | ||
| # - name: Set up Python | ||
| # uses: actions/setup-python@v4 | ||
| # with: | ||
| # python-version: 3.9 | ||
| # - name: Install the required python packages | ||
| # run: python -m pip install .[docs] | ||
| # - name: Other installations | ||
| # run: | | ||
| # sudo apt-get update | ||
| # sudo apt-get install -y build-essential git wget curl | ||
| # - name: Create local docs | ||
| # run: | | ||
| # mkdir docs | ||
| # cp -r src/docs/* docs/ | ||
| # touch docs/.nojekyll | ||
| # cp erdiagram-autogen/ansrs.md docs/ansrs.md | ||
| # cp erdiagram-autogen/genome_annotation.md docs/genome_annotation.md | ||
| # cp erdiagram-autogen/library_generation.md docs/library_generation.md | ||
| # gen-doc -d docs linkml-schema/library_generation.yaml | ||
| # mv docs/index.md docs/index_library_generation.md | ||
| # gen-doc -d docs linkml-schema/ansrs.yaml | ||
| # mv docs/index.md docs/index_ansrs.md | ||
| # gen-doc -d docs linkml-schema/genome_annotation.yaml | ||
| # mv docs/index.md docs/index_genome_annotation.md | ||
| # mv docs/index_main.md docs/index.md | ||
| # - name: Deploy to GitHub Pages | ||
| # run: mkdocs gh-deploy --force | ||
