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ENH: Add fetch-ncbi-taxonomy action #118

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merged 26 commits into from
Jan 29, 2024

Reveiw comments Michal

9a2de57
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Merged

ENH: Add fetch-ncbi-taxonomy action #118

Reveiw comments Michal
9a2de57
Select commit
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Codecov / codecov/project succeeded Jan 24, 2024 in 0s

97.74% (+0.00%) compared to 0668991

View this Pull Request on Codecov

97.74% (+0.00%) compared to 0668991

Details

Codecov Report

Attention: 15 lines in your changes are missing coverage. Please review.

Comparison is base (0668991) 97.74% compared to head (9a2de57) 97.74%.
Report is 14 commits behind head on main.

Files Patch % Lines
q2_moshpit/kraken2/classification.py 91.80% 5 Missing ⚠️
q2_moshpit/_examples.py 50.00% 2 Missing ⚠️
q2_moshpit/kaiju/classification.py 97.75% 2 Missing ⚠️
q2_moshpit/kraken2/database.py 81.81% 2 Missing ⚠️
q2_moshpit/_utils.py 93.33% 1 Missing ⚠️
q2_moshpit/eggnog/_utils.py 83.33% 1 Missing ⚠️
q2_moshpit/kaiju/tests/test_classification.py 99.02% 1 Missing ⚠️
q2_moshpit/kraken2/helpers.py 95.45% 1 Missing ⚠️
Additional details and impacted files 
@@           Coverage Diff            @@
##             main     #118    +/-   ##
========================================
  Coverage   97.74%   97.74%            
========================================
  Files          35       45    +10     
  Lines        2172     2799   +627     
========================================
+ Hits         2123     2736   +613     
- Misses         49       63    +14

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