Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

ENH: Add fetch-ncbi-taxonomy action #118

Merged
merged 26 commits into from
Jan 29, 2024

Reveiw comments Michal

9a2de57
Select commit
Loading
Failed to load commit list.
Merged

ENH: Add fetch-ncbi-taxonomy action #118

Reveiw comments Michal
9a2de57
Select commit
Loading
Failed to load commit list.
Codecov / codecov/patch succeeded Jan 24, 2024 in 0s

97.93% of diff hit (target 97.74%)

View this Pull Request on Codecov

97.93% of diff hit (target 97.74%)

Annotations

Check warning on line 15 in q2_moshpit/_examples.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/_examples.py#L15 

Added line #L15 was not covered by tests

Check warning on line 17 in q2_moshpit/_examples.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/_examples.py#L17 

Added line #L17 was not covered by tests

Check warning on line 30 in q2_moshpit/_utils.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/_utils.py#L30 

Added line #L30 was not covered by tests

Check warning on line 26 in q2_moshpit/eggnog/_utils.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/eggnog/_utils.py#L26 

Added line #L26 was not covered by tests

Check warning on line 189 in q2_moshpit/kaiju/classification.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/kaiju/classification.py#L188-L189 

Added lines #L188 - L189 were not covered by tests

Check warning on line 267 in q2_moshpit/kaiju/tests/test_classification.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/kaiju/tests/test_classification.py#L267 

Added line #L267 was not covered by tests

Check warning on line 76 in q2_moshpit/kraken2/classification.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/kraken2/classification.py#L76 

Added line #L76 was not covered by tests

Check warning on line 83 in q2_moshpit/kraken2/classification.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/kraken2/classification.py#L82-L83 

Added lines #L82 - L83 were not covered by tests

Check warning on line 85 in q2_moshpit/kraken2/classification.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/kraken2/classification.py#L85 

Added line #L85 was not covered by tests

Check warning on line 87 in q2_moshpit/kraken2/classification.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/kraken2/classification.py#L87 

Added line #L87 was not covered by tests

Check warning on line 313 in q2_moshpit/kraken2/database.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/kraken2/database.py#L312-L313 

Added lines #L312 - L313 were not covered by tests

Check warning on line 44 in q2_moshpit/kraken2/helpers.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

q2_moshpit/kraken2/helpers.py#L44 

Added line #L44 was not covered by tests
View more details on Codecov