chore: Bump ppanggolin version (#188)

Signed-off-by: jvfe <[email protected]>
beiko-lab · Apr 10, 2024 · e47e851 · e47e851
1 parent 0b6353a
commit e47e851
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Showing 3 changed files with 7 additions and 6 deletions.
diff --git a/.gitignore b/.gitignore
@@ -7,4 +7,5 @@ testing/
 testing*
 *.pyc
 .nf-test
+.nf-test.log
 test.nf
diff --git a/modules/local/ppanggolin/msa/main.nf b/modules/local/ppanggolin/msa/main.nf
@@ -3,10 +3,10 @@ process PPANGGOLIN_MSA {
     label 'process_high'
     label 'process_high_memory'
 
-    conda "bioconda::ppanggolin=1.2.105"
+    conda "bioconda::ppanggolin=2.0.5"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'https://depot.galaxyproject.org/singularity/ppanggolin:1.2.105--py37h8902056_0':
-        'quay.io/biocontainers/ppanggolin:1.2.105--py37h8902056_0' }"
+        'https://depot.galaxyproject.org/singularity/ppanggolin:2.0.5--py39hf95cd2a_0':
+        'quay.io/biocontainers/ppanggolin:2.0.5--py39hf95cd2a_0' }"
 
     input:
     tuple val(meta), path(pangenome)

diff --git a/modules/local/ppanggolin/workflow/main.nf b/modules/local/ppanggolin/workflow/main.nf
@@ -4,10 +4,10 @@ process PPANGGOLIN_WORKFLOW {
     label 'process_high_memory'
     label 'process_long'
 
-    conda "bioconda::ppanggolin=1.2.105"
+    conda "bioconda::ppanggolin=2.0.5"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'https://depot.galaxyproject.org/singularity/ppanggolin:1.2.105--py37h8902056_0':
-        'quay.io/biocontainers/ppanggolin:1.2.105--py37h8902056_0' }"
+        'https://depot.galaxyproject.org/singularity/ppanggolin:2.0.5--py39hf95cd2a_0':
+        'quay.io/biocontainers/ppanggolin:2.0.5--py39hf95cd2a_0' }"
 
     input:
     tuple val(meta), path(samplesheet)