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hotfix: Remove publishDir from phylo check
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Signed-off-by: jvfe <[email protected]>
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jvfe committed Mar 29, 2024
1 parent d16cde3 commit 0b6353a
Showing 1 changed file with 0 additions and 3 deletions.
3 changes: 0 additions & 3 deletions modules/local/samplesheet_check.nf
Original file line number Diff line number Diff line change
Expand Up @@ -46,9 +46,6 @@ process ASSEMBLYSHEET_CHECK {

process PHYLOSHEET_CHECK {
tag "$phylosheet"
publishDir "${params.outdir}",
mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:'pipeline_info', publish_id:'') }

conda (params.enable_conda ? "conda-forge::python=3.8.3" : null)
if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
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