Reviewed all workflows to bump version to latest and ensure py3.12 is…

… included in testing.

.github/workflows/documentation_deploy.yaml

@@ -16,12 +16,12 @@ jobs:
   build_doc:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Setup Pages
         id: pages
-        uses: actions/configure-pages@v2
+        uses: actions/configure-pages@v5
       - uses: r-lib/actions/setup-pandoc@v2
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v5
       - name: Install dependencies
         run: |
           pip install -r requirements.txt
@@ -32,7 +32,7 @@ jobs:
           cd docs
           make html
       - name: Upload artifact
-        uses: actions/upload-pages-artifact@v1
+        uses: actions/upload-pages-artifact@v4
         with:
           # Upload entire repository
           path: './docs/build/html'
@@ -45,4 +45,4 @@ jobs:
     steps:
       - name: Deploy to GitHub Pages
         id: deployment
-        uses: actions/deploy-pages@v2
+        uses: actions/deploy-pages@v4

.github/workflows/documentation_test.yml

@@ -19,12 +19,12 @@ jobs:
   build_doc:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Setup Pages
         id: pages
-        uses: actions/configure-pages@v2
+        uses: actions/configure-pages@v5
       - uses: r-lib/actions/setup-pandoc@v2
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v5
         with:
           python-version: 3.9
       - name: Install dependencies
@@ -38,7 +38,7 @@ jobs:
           make html
           make doctest
       - name: Upload artifact
-        uses: actions/upload-pages-artifact@v1
+        uses: actions/upload-pages-artifact@v4
         with:
           # Upload entire repository
           path: './docs/build/html'

.github/workflows/lint.yml

@@ -1,23 +1,22 @@
 name: lint
 
 on:
-  push:
-    branches:
-      [pyOpenSci-review]
   pull_request:
     branches:
-      [pyOpenSci-review]
-
+      [main]
+  push:
+    branches:
+      [main, dev]
 
 jobs:
   lint:
     runs-on: ubuntu-latest
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - name: Set up Python
-        uses: actions/setup-python@v4
+        uses: actions/setup-python@v5
         with:
           python-version: 3.x
 

.github/workflows/nb_refresh.yml

@@ -12,9 +12,9 @@ jobs:
 
     steps:
       - name: Checkout repo
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
       - name: Set up Python
-        uses: actions/setup-python@v4
+        uses: actions/setup-python@v5
         with:
           python-version: 3.x
       - name: Update pip and install depends
@@ -33,7 +33,7 @@ jobs:
           jupyter nbconvert --to notebook --execute demos/Harmonize_Tampa_Detailed.ipynb --ExecutePreprocessor.kernel_name='python3' --output ../demos/Harmonize_Tampa_Detailed
           jupyter nbconvert --to notebook --execute demos/Harmonize_Tampa_Simple.ipynb --ExecutePreprocessor.kernel_name='python3' --output ../demos/Harmonize_Tampa_Simple
       - name: commit updated notebook
-        uses: EndBug/add-and-commit@v7
+        uses: EndBug/add-and-commit@v9
         with:
           author_name: 'github-actions[bot]'
           author_email: 'github-actions[bot]@users.noreply.github.com'

.github/workflows/test.yml

@@ -1,14 +1,16 @@
 name: test
 
 on:
-  push:
-    branches:
-      [main]
   pull_request:
     branches:
       [main]
+  push:
+    branches:
+      [main, dev]
   schedule:
     - cron: '11 1 1 * *'
+  # Allows you to run this workflow manually from the Actions tab
+  workflow_dispatch:
 
 jobs:
   test:
@@ -19,16 +21,16 @@ jobs:
     strategy:
       matrix:
         os: [ubuntu-latest, macos-latest, windows-latest]
-        python-version: ['3.8', '3.9', '3.10', '3.11']
+        python-version: ['3.8', '3.9', '3.10', '3.11', '3.12']
         #exclude:
         #  - os: windows-latest
         #    python-version: "3.7"
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v5
         with:
           python-version: ${{ matrix.python-version }}
 
@@ -63,6 +65,11 @@ jobs:
           pip install https://github.com/cgohlke/geospatial-wheels/releases/download/v2023.7.16/GDAL-3.7.1-cp311-cp311-win_amd64.whl
           pip install https://github.com/cgohlke/geospatial-wheels/releases/download/v2023.7.16/Fiona-1.9.4.post1-cp311-cp311-win_amd64.whl    
       
+      - if: ${{ (matrix.os == 'windows-latest') && (matrix.python-version == 3.12) }}
+        run: |
+          pip install https://github.com/cgohlke/geospatial-wheels/releases/download/v2024.2.18/GDAL-3.8.4-cp312-cp312-win_amd64.whl
+          pip install https://github.com/cgohlke/geospatial-wheels/releases/download/v2024.2.18/fiona-1.9.5-cp312-cp312-win_amd64.whl
+      
       - name: Install package and dependencies
         run: |
           python -m pip install --no-deps .

.github/workflows/test_r.yaml

@@ -1,12 +1,12 @@
 name: R-test
 
 on:
-  push:
-    branches:
-      [main]
   pull_request:
     branches:
       [main]
+  push:
+    branches:
+      [main, dev]
   schedule:
     - cron: '11 1 1 * *'
   # Allows you to run this workflow manually from the Actions tab
@@ -22,7 +22,7 @@ jobs:
     strategy:
       matrix:
         os: [windows-latest, macos-latest]
-        python-version: ['3.8', '3.9', '3.10', '3.11']
+        python-version: ['3.8', '3.9', '3.10', '3.11', '3.12']
 
     steps:
       - uses: actions/checkout@v4

requirements_dev.txt

@@ -6,3 +6,4 @@ sphinxcontrib-spelling
 nbsphinx
 nbsphinx_link
 notebook
+ruff