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Add kilosort4 wrapper tests #35

Add kilosort4 wrapper tests

Add kilosort4 wrapper tests #35

Workflow file for this run

name: Testing Kilosort4
on:
workflow_dispatch:
schedule:
- cron: "0 12 * * 0" # Weekly on Sunday at noon UTC
pull_request:
types: [synchronize, opened, reopened]
branches:
- main
jobs:
versions:
runs-on: ubuntu-latest
outputs:
matrix: ${{ steps.set-matrix.outputs.matrix }}
steps:
- name: Checkout repository
uses: actions/checkout@v2
- name: Set up Python
uses: actions/setup-python@v2
with:
python-version: 3.12
- name: Install dependencies
run: |
pip install requests
- name: Fetch package versions from PyPI
run: |
python .github/scripts/check_kilosort4_releases.py
shell: bash
- name: Set matrix data
id: set-matrix
run: |
pwd
ls .github/scripts
echo "matrix=$(jq -c . < .github/scripts/kilosort4-latest-version.json)" >> $GITHUB_OUTPUT
test:
needs: versions
name: ${{ matrix.ks_version }}
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
python-version: ["3.12"] # TODO: "3.9", # Lower and higher versions we support
os: [ubuntu-latest]
ks_version: ${{ fromJson(needs.versions.outputs.matrix) }}
steps:
- uses: actions/checkout@v2
- name: Setup Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install packages
run: |
pip install -e .[test]
shell: bash
- name: Install Kilosort
run: |
pip install kilosort==${{ matrix.ks_version }}
shell: bash
- name: Run new kilosort4 tests
run: |
pytest -k test_kilosort4_new --durations=0
shell: bash