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Fix/98 update log suppression #99

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merged 3 commits into from
Oct 25, 2024
Merged

Fix/98 update log suppression #99

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579441d
Use Setup file to handle logger setup/teardown
AlexAxthelm Oct 25, 2024
f155565
Remove logger setup/teardown in individual files
AlexAxthelm Oct 25, 2024
5087f8d
Increment version number to 0.0.0.9012
AlexAxthelm Oct 25, 2024
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13 changes: 13 additions & 0 deletions tests/testthat/setup.R
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Original file line number Diff line number Diff line change
@@ -0,0 +1,13 @@
## save current settings so that we can reset later

## Logger Settings
# Set threshold to OFF, and capture previous state
logger_threshold <- logger::log_threshold("OFF")

## Tear down function
withr::defer(
expr = {
logger::log_threshold(logger_threshold)
},
envir = teardown_env()
)
15 changes: 0 additions & 15 deletions tests/testthat/test-analysis_prechecks.R
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Original file line number Diff line number Diff line change
@@ -1,18 +1,3 @@
## save current settings so that we can reset later
threshold <- logger::log_threshold()
appender <- logger::log_appender()
layout <- logger::log_layout()
on.exit({
## reset logger settings
logger::log_threshold(threshold)
logger::log_layout(layout)
logger::log_appender(appender)
})

logger::log_appender(logger::appender_stdout)
logger::log_threshold(logger::FATAL)
logger::log_layout(logger::layout_simple)

test_that("audit_prechecks works when all files are present", {
pacta_data_dir <- withr::local_tempdir()
filenames <- c(
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15 changes: 0 additions & 15 deletions tests/testthat/test-audit_prechecks.R
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Original file line number Diff line number Diff line change
@@ -1,18 +1,3 @@
## save current settings so that we can reset later
threshold <- logger::log_threshold()
appender <- logger::log_appender()
layout <- logger::log_layout()
on.exit({
## reset logger settings
logger::log_threshold(threshold)
logger::log_layout(layout)
logger::log_appender(appender)
})

logger::log_appender(logger::appender_stdout)
logger::log_threshold(logger::FATAL)
logger::log_layout(logger::layout_simple)

test_that("audit_prechecks works when all files are present", {
pacta_data_dir <- withr::local_tempdir()
filenames <- c(
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15 changes: 0 additions & 15 deletions tests/testthat/test-calc_weights_prechecks.R
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Original file line number Diff line number Diff line change
@@ -1,18 +1,3 @@
## save current settings so that we can reset later
threshold <- logger::log_threshold()
appender <- logger::log_appender()
layout <- logger::log_layout()
on.exit({
## reset logger settings
logger::log_threshold(threshold)
logger::log_layout(layout)
logger::log_appender(appender)
})

logger::log_appender(logger::appender_stdout)
logger::log_threshold(logger::FATAL)
logger::log_layout(logger::layout_simple)

test_that("audit_prechecks works when all files are present", {
data_dir <- withr::local_tempdir()
filenames <- c(
Expand Down
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