CI #55
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| # source: https://github.com/invenia/PkgTemplates.jl/blob/master/.github/workflows/CI.yml | |
| name: CI | |
| # Run on master, tags, or any pull request | |
| on: | |
| schedule: | |
| - cron: '0 2 * * *' # Daily at 2 AM UTC (8 PM CST) | |
| push: | |
| branches: [main] | |
| tags: ["*"] | |
| pull_request: | |
| jobs: | |
| test: | |
| name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| version: | |
| - "1" | |
| - "1.9" | |
| os: | |
| - ubuntu-latest | |
| - macOS-latest | |
| - windows-latest | |
| arch: | |
| - x64 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: julia-actions/setup-julia@v1 | |
| with: | |
| version: ${{ matrix.version }} | |
| arch: ${{ matrix.arch }} | |
| - uses: actions/cache@v2 | |
| env: | |
| cache-name: cache-artifacts | |
| with: | |
| path: ~/.julia/artifacts | |
| key: ${{ runner.os }}-${{ matrix.arch }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }} | |
| restore-keys: | | |
| ${{ runner.os }}-${{ matrix.arch }}-test-${{ env.cache-name }}- | |
| ${{ runner.os }}-${{ matrix.arch }}-test- | |
| ${{ runner.os }}-${{ matrix.arch }}- | |
| ${{ runner.os }}- | |
| - uses: julia-actions/julia-buildpkg@latest | |
| - run: | | |
| git config --global user.name Tester | |
| git config --global user.email [email protected] | |
| - uses: julia-actions/julia-runtest@latest | |
| - uses: julia-actions/julia-processcoverage@v1 | |
| - uses: codecov/codecov-action@v1 | |
| with: | |
| file: lcov.info | |
| docs: | |
| name: Documentation | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: julia-actions/setup-julia@v1 | |
| with: | |
| version: '1' | |
| - run: | | |
| git config --global user.name name | |
| git config --global user.email email | |
| git config --global github.user username | |
| - run: | | |
| julia --project=docs -e ' | |
| using Pkg | |
| Pkg.add("Documenter") | |
| Pkg.add(url="https://github.com/kose-y/SKFR.jl", rev="master") | |
| Pkg.add(url="https://github.com/OpenMendel/OpenADMIXTURE.jl", rev="main") | |
| Pkg.develop(PackageSpec(path=pwd())) # Was before instantiate() | |
| Pkg.instantiate()' | |
| - run: | | |
| julia --project=docs -e ' | |
| using Documenter: doctest | |
| using HaploADMIXTURE | |
| doctest(HaploADMIXTURE)' | |
| - run: julia --project=docs docs/make.jl | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }} |