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@OpenMendel

OpenMendel

Modern Statistical Genetics Software

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  1. SnpArrays.jl SnpArrays.jl Public

    Compressed storage for SNP data

    Julia 44 9

  2. MendelImpute.jl MendelImpute.jl Public

    OpenMendel package for haplotyping and imputation

    Julia 24 1

  3. MendelIHT.jl MendelIHT.jl Public

    Iterative hard thresholding for l0 penalized regression

    Julia 22 4

  4. OrdinalGWAS.jl OrdinalGWAS.jl Public

    Genome-wide association studies (GWAS) for ordered categorical phenotypes

    Julia 21 7

  5. VCFTools.jl VCFTools.jl Public

    Julia utilities for handling VCF files

    Julia 18 4

  6. TrajGWAS.jl TrajGWAS.jl Public

    Julia 13 1

Repositories

Showing 10 of 37 repositories
  • MendelImpute.jl Public

    OpenMendel package for haplotyping and imputation

    OpenMendel/MendelImpute.jl’s past year of commit activity
    Julia 24 1 2 3 Updated Dec 12, 2024
  • TrajGWAS.jl Public
    OpenMendel/TrajGWAS.jl’s past year of commit activity
    Julia 13 MIT 1 8 2 Updated Dec 12, 2024
  • QuasiCopula.jl Public

    A Flexible Quasi-Copula Distribution for Statistical Modeling

    OpenMendel/QuasiCopula.jl’s past year of commit activity
    Julia 1 MIT 1 1 8 Updated Dec 12, 2024
  • HaploADMIXTURE.jl Public
    OpenMendel/HaploADMIXTURE.jl’s past year of commit activity
    Julia 2 MIT 0 0 1 Updated Dec 12, 2024
  • OrdinalMultinomialModels.jl Public

    ordered multinomial models

    OpenMendel/OrdinalMultinomialModels.jl’s past year of commit activity
    Julia 11 MIT 2 2 (1 issue needs help) 0 Updated Dec 12, 2024
  • OpenADMIXTURE.jl Public
    OpenMendel/OpenADMIXTURE.jl’s past year of commit activity
    Julia 7 MIT 1 2 1 Updated Dec 12, 2024
  • PGENFiles.jl Public
    OpenMendel/PGENFiles.jl’s past year of commit activity
    Julia 3 MIT 1 0 1 Updated Dec 12, 2024
  • OrdinalGWAS.jl Public

    Genome-wide association studies (GWAS) for ordered categorical phenotypes

    OpenMendel/OrdinalGWAS.jl’s past year of commit activity
    Julia 21 MIT 7 5 1 Updated Dec 12, 2024
  • BGEN.jl Public
    OpenMendel/BGEN.jl’s past year of commit activity
    Julia 10 MIT 0 3 (1 issue needs help) 3 Updated Dec 12, 2024
  • SnpArrays.jl Public

    Compressed storage for SNP data

    OpenMendel/SnpArrays.jl’s past year of commit activity
    Julia 44 9 23 (3 issues need help) 5 Updated Dec 12, 2024
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