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[BF]: added bids-validator package
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alexpron committed Jul 22, 2024
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2 changes: 1 addition & 1 deletion .github/workflows/conda-installation.yml
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Expand Up @@ -22,7 +22,7 @@ jobs:
- name: Install dependencies
shell: bash -el {0}
run: |
conda install -c conda-forge -c https://conda.anaconda.org/simpleitk SimpleITK brotli certifi charset-normalizer dicom-anonymizer idna importlib-metadata 'numpy<2.0' pandas py7zr pybcj pycryptodomex pyppmd pytz pydicom python-dotenv python-dateutil requests six texttable tqdm typing_extensions urllib3 zipp pydicom dicom2nifti Pillow heudiconv git-annex=*=alldep* datalad
conda install -c conda-forge -c https://conda.anaconda.org/simpleitk SimpleITK brotli bids-validator certifi charset-normalizer dicom-anonymizer idna importlib-metadata 'numpy<2.0' pandas py7zr pybcj pycryptodomex pyppmd pytz pydicom python-dotenv python-dateutil requests six texttable tqdm typing_extensions urllib3 zipp pydicom dicom2nifti Pillow heudiconv git-annex=*=alldep* datalad
# Create virtual env under each python version
# (optional and a bit redundant because we are already on a specific python)
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -24,7 +24,7 @@ In an active conda virtual environment type
```bash
#use pip packages as dependencies
# install missing conda packages (far simpler than using pip)
conda install -c conda-forge -c https://conda.anaconda.org/simpleitk SimpleITK brotli certifi charset-normalizer dicom-anonymizer idna importlib-metadata 'numpy<2.0' pandas py7zr pybcj pycryptodomex pyppmd pytz pydicom python-dotenv python-dateutil requests six texttable tqdm typing_extensions urllib3 zipp pydicom dicom2nifti Pillow heudiconv git-annex=*=alldep* datalad
conda install -c conda-forge -c https://conda.anaconda.org/simpleitk SimpleITK brotli bids-validator certifi charset-normalizer dicom-anonymizer idna importlib-metadata 'numpy<2.0' pandas py7zr pybcj pycryptodomex pyppmd pytz pydicom python-dotenv python-dateutil requests six texttable tqdm typing_extensions urllib3 zipp pydicom dicom2nifti Pillow heudiconv git-annex=*=alldep* datalad

```
## Usage
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