fixing unittest memory leak

Makefile.am

@@ -76,7 +76,7 @@ io_unit_tests_LDADD    = -lcppunit -ldl $(common_LDADD)
 
 current_unit_tests_SOURCES = $(common_src) \
 					 tests/unittest/test_runner.cpp \
-					 tests/unittest/test_vcfReader.cpp
+					 tests/unittest/test_mcmc.cpp
 
 current_unit_tests_CXXFLAGS = $(common_flags) -DNDEBUG -DUNITTEST -Wno-write-strings --coverage
 current_unit_tests_LDADD    = -lcppunit -ldl $(common_LDADD)

tests/test_binary.sh

@@ -19,7 +19,7 @@ function test_dEploid {
     valgrind --error-exitcode=1 --leak-check=full -q --gen-suppressions=yes ./dEploid $@ -seed $i > /dev/null
     if [ $? -ne 0 ]; then
       echo ""
-      echo "Valgrind check of \"./dEploid $@ -seed $i\" failed."
+      echo "Valgrind check of \"valgrind --error-exitcode=1 --leak-check=full -q --gen-suppressions=yes ./dEploid $@ -seed $i\" failed."
       exit 1
     fi
 

tests/unittest/test_mcmc.cpp

@@ -332,15 +332,15 @@ class TestMcmcMachinery: public CppUnit::TestCase {
         CPPUNIT_ASSERT_EQUAL(nRepeat, this->mcmcMachinery_->mcmcSample_->proportion.size());
         CPPUNIT_ASSERT_EQUAL(nRepeat, this->mcmcMachinery_->mcmcSample_->sumLLKs.size());
         CPPUNIT_ASSERT_EQUAL(nRepeat, this->mcmcMachinery_->mcmcSample_->moves.size());
-        vector <size_t> counter(3, 0);
+        vector <size_t> counter(4, 0);
         for(size_t i = 0; i < nRepeat; i++) {
             counter[this->mcmcMachinery_->mcmcSample_->moves[i]] += 1;
         }
-        for(size_t i = 0; i < 3; i++) {
-            CPPUNIT_ASSERT_DOUBLES_EQUAL(0.333333,(double)counter[i]/(double)nRepeat, epsilon2);
+        for(size_t i = 0; i < 4; i++) {
+            CPPUNIT_ASSERT_DOUBLES_EQUAL(0.25,(double)counter[i]/(double)nRepeat, epsilon2);
         }
 
-        // IBD
+        //// IBD
         CPPUNIT_ASSERT_NO_THROW(this->mcmcMachineryIbd_->setKstrain(3));
         CPPUNIT_ASSERT_NO_THROW(this->mcmcMachineryIbd_->calcMaxIteration(100, 1, 0.5));
         CPPUNIT_ASSERT_NO_THROW(this->mcmcMachineryIbd_->runMcmcChain(true, true));