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update

update #202

Workflow file for this run

name: Build and test
on:
push:
branches:
- "*"
pull_request:
branches:
- "*"
jobs:
build:
strategy:
matrix:
name: [ubuntu-gcc-11,
ubuntu-clang-15,
macos-xcode-12.3,
]
include:
- name: ubuntu-gcc-11
os: ubuntu-latest
compiler: gcc
version: "11"
- name: ubuntu-clang-15
os: ubuntu-latest
compiler: clang
version: "15"
- name: macos-xcode-12.3
os: macos-latest
compiler: xcode
version: "12.3"
runs-on: ${{ matrix.os }}
steps:
- uses: actions/checkout@v1
- uses: actions/setup-python@v1
with:
python-version: 3.11
- name: Install dependencies (linux)
if: runner.os == 'Linux' && matrix.name != 'windows'
run: |
sudo apt-get install libcppunit-dev valgrind r-base-core lcov doxygen graphviz ccache
if [ "${{ matrix.compiler }}" = "gcc" ]; then
sudo apt-get install -y g++-${{ matrix.version }}
echo "CC=ccache gcc-${{ matrix.version }}" >> $GITHUB_ENV
echo "CXX=ccache g++-${{ matrix.version }}" >> $GITHUB_ENV
else
sudo apt-get install -y clang-${{ matrix.version }}
echo "CC=ccache clang-${{ matrix.version }}" >> $GITHUB_ENV
echo "CXX=ccache clang++-${{ matrix.version }}" >> $GITHUB_ENV
fi
- name: Install dependencies (macOS)
if: runner.os == 'macOS'
run: |
brew install cppunit r lcov doxygen graphviz ccache coreutils automake
echo "DEVELOPER_DIR=/Applications/Xcode_${{ matrix.version }}.app/Contents/Developer" >> $GITHUB_ENV
echo "CC=ccache clang" >> $GITHUB_ENV
echo "CXX=ccache clang++" >> $GITHUB_ENV
ccache --set-config=cache_dir=$HOME/.ccache
- name: Install python packages
run: python3 -mpip install cpp-coveralls cpplint
- name: Check style
run: .ci/style.sh
- name: Prepare ccache timestamp
id: ccache_cache_timestamp
run: |
if [ "$RUNNER_OS" = "Linux" ]; then
stamp=$(date '+%s')
else
stamp=$(gdate '+%s')
fi
echo "${stamp}"
echo "::set-output name=timestamp::${stamp}"
- name: ccache cache files
uses: actions/cache@v2
with:
path: ~/.ccache
key: ${{ matrix.name }}-ccache-${{ steps.ccache_cache_timestamp.outputs.timestamp }}
restore-keys: |
${{ matrix.name }}-ccache-
- name: configure
run: ./bootstrap
- name: make
run: make -j4
- name: make check
run: make -j4 check
- name: make install
run: sudo make install
- name: test
run: |
# Mac OS does not have valgrind!
if [ "$RUNNER_OS" == Linux ]; then echo ::group::binary ; ./tests/test_binary.sh; fi
echo ::group::POS
./tests/testPOS.sh
echo ::group::binaryVcf
./tests/test_binaryVcfVsTxt.sh
echo ::group::test-against-previous-version
./tests/test-against-previous-version.sh
echo ::group::binary reproducible
./tests/test_binaryReproducible.sh
- name: docs
run: if [ $TRAVIS_OS_NAME == linux ]; then cd docs/doxygen; doxygen Doxyfile; fi
- name: run coverage
if: matrix.name == 'ubuntu-gcc-9'
run: |
tests/test-coverage-coverall.sh
# See: https://github.com/marketplace/actions/coveralls-github-action
- name: Coveralls
if: matrix.name == 'ubuntu-gcc-9'
uses: coverallsapp/[email protected]
with:
github-token: ${{ secrets.GITHUB_TOKEN }}
#run: coveralls --exclude lib --exclude tests --exclude src/random --exclude src/codeCogs/ --exclude src/export/ --exclude src/gzstream/ --gcov-options '\-lp'