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Code to perform QC-FC analysis on human connectome project (HCP) data with different functional connectivity (FC) measures

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BassettLab/motion-FC-metrics

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system_identifiability_analyses
system_identifiability_analyses
 
 
.gitignore
.gitignore
 
 
FC_coherence.m
FC_coherence.m
 
 
FC_mutualInformation.m
FC_mutualInformation.m
 
 
FC_mutualInformationTime.m
FC_mutualInformationTime.m
 
 
FC_partialCorr.m
FC_partialCorr.m
 
 
FC_pearson.m
FC_pearson.m
 
 
FC_spearman.m
FC_spearman.m
 
 
FC_tikhonovPartialCorr.m
FC_tikhonovPartialCorr.m
 
 
FC_waveletCoherence.m
FC_waveletCoherence.m
 
 
FD_J.1D
FD_J.1D
 
 
README.md
README.md
 
 
arrayJob_FC.sh
arrayJob_FC.sh
 
 
bandpass_filter_butterworth.m
bandpass_filter_butterworth.m
 
 
build_octave_singularity.sh
build_octave_singularity.sh
 
 
calculateFingerprintAccuracy.m
calculateFingerprintAccuracy.m
 
 
calculatePowerFD.m
calculatePowerFD.m
 
 
calculateRotationalAffine.m
calculateRotationalAffine.m
 
 
calculateTikhonovParameter.m
calculateTikhonovParameter.m
 
 
compileSubjectList.m
compileSubjectList.m
 
 
compileSubjectList_incomplete.m
compileSubjectList_incomplete.m
 
 
computeEdgeWeights.m
computeEdgeWeights.m
 
 
computeFunctionalConnectivity.m
computeFunctionalConnectivity.m
 
 
computeICC.m
computeICC.m
 
 
computeNMI.m
computeNMI.m
 
 
computeQCFC.m
computeQCFC.m
 
 
engine_FunctionalConnectivity_gordon.m
engine_FunctionalConnectivity_gordon.m
 
 
engine_FunctionalConnectivity_yeo.m
engine_FunctionalConnectivity_yeo.m
 
 
filterRealignmentParameters.m
filterRealignmentParameters.m
 
 
jobScript_FC_perSubject_gordon.sh
jobScript_FC_perSubject_gordon.sh
 
 
jobScript_FC_perSubject_yeo.sh
jobScript_FC_perSubject_yeo.sh
 
 
jobScript_FC_specificSubject.sh
jobScript_FC_specificSubject.sh
 
 
jobScript_calculateTikhonovParameter.sh
jobScript_calculateTikhonovParameter.sh
 
 
jobScript_computeQCFC.sh
jobScript_computeQCFC.sh
 
 
plotQCFCstats.m
plotQCFCstats.m
 
 
test.py
test.py
 
 
transfer_HCP_movementData.sh
transfer_HCP_movementData.sh
 
 

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Code to perform QC-FC analysis on human connectome project (HCP) data with different functional connectivity (FC) measures

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