refactor scripts

zavolanlab · Jan 5, 2024 · 5f8f62d · 5f8f62d
1 parent bf7bea1
commit 5f8f62d
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Showing 2 changed files with 4 additions and 4 deletions.
diff --git a/htsinfer/get_library_type.py b/htsinfer/get_library_type.py
@@ -127,8 +127,8 @@ def _evaluate_mate_relationship(
                 self.mapping.library_type.relationship = (
                     StatesTypeRelationship.split_mates
                 )
-        elif self.library_source.file_1.short_name is not None \
-                and self.library_source.file_2.short_name is not None:
+        elif (self.library_source.file_1.short_name is not None
+              and self.library_source.file_2.short_name is not None):
             self.mapping.library_type.relationship \
                 = StatesTypeRelationship.not_available
             self.mapping.library_source = self.library_source

diff --git a/htsinfer/get_read_orientation.py b/htsinfer/get_read_orientation.py
@@ -76,8 +76,8 @@ def evaluate(self) -> ResultsOrientation:
         self.mapping.tmp_dir = self.tmp_dir
 
         if not self.mapping.mapped \
-                and self.library_source.file_1.short_name is not None \
-                or self.library_source.file_2.short_name is not None:
+                and (self.library_source.file_1.short_name is not None
+                     or self.library_source.file_2.short_name is not None):
             self.mapping.evaluate()
         else:
             LOGGER.warning(