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Xiyu committed Apr 22, 2024
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Expand Up @@ -35,6 +35,7 @@ src/*.dll
# ignore data folder
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Expand Up @@ -2,7 +2,7 @@ Package: SpaTopic
Type: Package
Title: Topic Inference to Identify Tissue Architecture in Multiplexed Images
Version: 1.1.0
Date: 2023-12-20
Date: 2023-04-22
Authors@R: person("Xiyu", "Peng", email = "[email protected]",
role = c("aut", "cre"),comment = c(ORCID = "0000-0003-4232-0910"))
Description: A novel spatial topic model to integrate both cell type and spatial information to identify the complex spatial tissue architecture on multiplexed tissue images without human intervention. The Package implements a collapsed Gibbs sampling algorithm for inference. 'SpaTopic' is scalable to large-scale image datasets without extracting neighborhood information for every single cell. For more details on the methodology, see <https://xiyupeng.github.io/SpaTopic/>.
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