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update titles & tooltips
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LibbyUX authored Aug 1, 2024
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15 changes: 5 additions & 10 deletions data/dashboards/experimental-data.yaml
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type: Dashboard
title: Experimental Data
description: >-
The HRA is constructed from experimental data and links back to the original sources.
High-quality datasets are used to compute HRA Cell Type Populations (HRApop) for anatomical structures.
Shown are basic statistics for the datasets that make up HRApop: bar graphs that detail how many datasets have been mapped
to the HRA by what methods, and a Sankey diagram with seven vertical bars showing from
left to right, for all datasets: source/portal, donor sex, donor age, donor race/ethnicity, donor BMI, organ,
single-cell (sc) transcriptomics vs sc-proteomics, whether the dataset is RUI-registered into a HRA 3D Digital Object (organ), and whether it is part of the atlas.
The HRA is constructed from experimental data linked back to the original sources. High-quality datasets are used to compute HRA Cell Type Populations (HRApop) for anatomical structures. Shown are basic statistics for the datasets represented in HRApop: bar graphs that detail how many datasets have been mapped to the HRA by what methods, and a Sankey diagram with nine vertical bars showing from left to right, for all datasets: source/portal, donor sex, donor age, donor race/ethnicity, donor BMI, organ, whether the dataset has a single-cell (sc) transcriptomics cell type population summary or a sc-proteomics summary or no summary, whether the dataset is RUI-registered into a HRA 3D Digital Object (organ), and whether it is part of the atlas.
link:
type: Link
url: https://doi.org/10.1101/2024.03.27.587041
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- type: MetricsContainer
items:
- title: Data Provenance
tooltip: Statistics covering counts of datasets and related entities in HRApop.
tooltip: Statistics covering counts of datasets and related entities in HRApop v0.10.2 in April 2024.
source: https://github.com/x-atlas-consortia/hra-pop/blob/main/output-data/v0.10.2/reports/universe-ad-hoc/data-provenance.csv
items:
- label: HuBMAP datasets
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- label: Commits
count: 1140
- type: VegaContainer
title: HRApop data mapped to the HRA
title: HRApop Data Mapped to the HRA
tooltip: This graph shows datasets mapped to the HRA grouped by Portal, Organ, Sex, Age, or Ethnicity.
aspectRatio: 3 / 1
specUrl: https://cdn.humanatlas.io/hra-dashboard-data/experimental-data/hra-pop-mapped-to-hra.vl.json
- type: IFrameContainer
title: HRApop Cell Type Populations Properties
tooltip: This Sankey diagram breaks down HRApop datasets by metadata.
title: HRApop Dataset Provenance and Properties
tooltip: This Sankey diagram shows HRApop datasets by source/portal, sex, age, race/ethnicity, BMI, organ, cell summary/modality, RUI-registration status, and whether it is part of the atlas.
aspectRatio: 3 / 1
iframeUrl: https://cdn.humanatlas.io/hra-dashboard-data/experimental-data/sankey_atlas.html

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