Fix MKL in CI Pipeline #131
Workflow file for this run
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| name: CMake | |
| on: [pull_request] | |
| jobs: | |
| linux-check-all-libs: | |
| runs-on: ubuntu-22.04 | |
| strategy: | |
| matrix: | |
| linalg_lib: [blis,openblas,netlib,intel-mkl] | |
| mpi_dist: [mpich,openmpi] | |
| int_interface: [lp64,ilp64] | |
| thread: [sequential,openmp,pthreads,tbb] | |
| exclude: | |
| - linalg_lib: netlib | |
| int_interface: ilp64 | |
| - linalg_lib: netlib | |
| thread: pthreads | |
| - linalg_lib: netlib | |
| thread: openmp | |
| - linalg_lib: intel-mkl | |
| thread: pthreads | |
| - linalg_lib: netlib | |
| mpi_dist: openmpi | |
| - linalg_lib: blis | |
| mpi_dist: openmpi | |
| - linalg_lib: openblas | |
| mpi_dist: openmpi | |
| - linalg_lib: blis | |
| thread: tbb | |
| - linalg_lib: openblas | |
| thread: tbb | |
| - linalg_lib: netlib | |
| thread: tbb | |
| env: | |
| MKLROOT: /opt/intel/oneapi/mkl/latest | |
| TBBROOT: /opt/intel/oneapi/tbb/latest | |
| TBB_IGNORE_HEADERS: TRUE | |
| CMAKE_PREFIX_PATH: '/home/software/install/${{matrix.linalg_lib}}-${{matrix.int_interface}}-${{matrix.thread}};/home/software/install/netlib-lp64-sequential' | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Ubuntu Setup | |
| run: | | |
| sudo apt-get -yq update && sudo apt-get install make wget curl libomp5 | |
| sudo make -C .github/workflows/linalg install/main | |
| sudo make -C .github/workflows/linalg install/cmake | |
| sudo apt-get clean | |
| sudo make -C .github/workflows/linalg apt-add-repository/intel-mkl | |
| - name: Setup MPI | |
| run: | | |
| sudo make -C .github/workflows/linalg install/${{matrix.mpi_dist}} | |
| which mpicc | |
| #- name: Setup TBB | |
| # if: ${{matrix.thread == 'tbb'}} | |
| # run: | | |
| # sudo apt-get install libtbb-dev | |
| - name: Build Linalg | |
| env: | |
| BUILD_TARGET: ${{matrix.linalg_lib}}/${{matrix.int_interface}}-${{matrix.thread}} | |
| run: | | |
| sudo make -C .github/workflows/linalg download/${{matrix.linalg_lib}} | |
| sudo make -C .github/workflows/linalg install/${BUILD_TARGET} | |
| - name: Add-On NETLIB | |
| # Disable for | |
| # - MKL b/c MKL already has a LAPACK/ScaLAPACK linker | |
| # - NETLIB b/c the NETLIB is already the used linear algebra lib (no need to add on) | |
| # - ILP64 b/c NETLIB isn't reliable for ILP64 yet | |
| if: ${{ matrix.linalg_lib != 'intel-mkl' && matrix.linalg_lib != 'netlib' && matrix.int_interface == 'lp64' }} | |
| run: | | |
| sudo make -C .github/workflows/linalg download/netlib | |
| sudo make -C .github/workflows/linalg install/netlib/lp64-sequential | |
| - name: FindBLAS Default | |
| # Disable for MKL-ILP64 b/c the default is LP64 unless otherwise specified | |
| if: ${{ matrix.linalg_lib != 'intel-mkl' || matrix.int_interface != 'ilp64' }} | |
| run: | | |
| cmake -H${GITHUB_WORKSPACE}/examples/blas/default \ | |
| -B${{runner.workspace}}/build-findblas-default \ | |
| -DCMAKE_MODULE_PATH=${GITHUB_WORKSPACE} \ | |
| -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} \ | |
| -DBLAS_THREAD_LAYER=${{matrix.thread}} | |
| .github/workflows/scripts/check_blas_cmake_cache.sh \ | |
| ${{runner.workspace}}/build-findblas-default \ | |
| ${{matrix.linalg_lib}} ${{matrix.thread}} ${{matrix.int_interface}} | |
| - name: FindBLAS Default (Error Output) | |
| if: ${{ failure() }} | |
| run: | | |
| ls ${{runner.workspace}}/build-findblas-default | |
| ls ${{runner.workspace}}/build-findblas-default/CMakeFiles | |
| #echo "CMAKE OUTPUT" && cat ${{runner.workspace}}/build-findblas-default/CMakeFiles/CMakeOutput.log | |
| echo "CMAKE ERROR" && cat ${{runner.workspace}}/build-findblas-default/CMakeFiles/CMakeError.log | |
| - name: FindBLAS Integer Specific | |
| run: | | |
| cmake -H${GITHUB_WORKSPACE}/examples/blas/${{matrix.int_interface}} \ | |
| -B${{runner.workspace}}/build-findblas-${{matrix.int_interface}} \ | |
| -DCMAKE_MODULE_PATH=${GITHUB_WORKSPACE} \ | |
| -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} \ | |
| -DBLAS_THREAD_LAYER=${{matrix.thread}} | |
| .github/workflows/scripts/check_blas_cmake_cache.sh \ | |
| ${{runner.workspace}}/build-findblas-${{matrix.int_interface}} \ | |
| ${{matrix.linalg_lib}} ${{matrix.thread}} ${{matrix.int_interface}} | |
| - name: FindBLAS Integer Specific (Error Output) | |
| if: ${{ failure() }} | |
| run: | | |
| #echo "CMAKE OUTPUT" && cat ${{runner.workspace}}/build-findblas-${{matrix.int_interface}}/CMakeFiles/CMakeOutput.log | |
| echo "CMAKE ERROR" && cat ${{runner.workspace}}/build-findblas-${{matrix.int_interface}}/CMakeFiles/CMakeError.log | |
| - name: FindBLAS Static Linkage | |
| run: | | |
| cmake -H${GITHUB_WORKSPACE}/examples/blas/${{matrix.int_interface}} \ | |
| -B${{runner.workspace}}/build-findblas-static \ | |
| -DCMAKE_MODULE_PATH=${GITHUB_WORKSPACE} \ | |
| -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} \ | |
| -DBLAS_THREAD_LAYER=${{matrix.thread}} \ | |
| -DBLAS_PREFERS_STATIC=ON | |
| .github/workflows/scripts/check_blas_cmake_cache.sh \ | |
| ${{runner.workspace}}/build-findblas-static \ | |
| ${{matrix.linalg_lib}} ${{matrix.thread}} ${{matrix.int_interface}} | |
| - name: FindBLAS Static Linkage (Error Output) | |
| if: ${{ failure() }} | |
| run: | | |
| #echo "CMAKE OUTPUT" && cat ${{runner.workspace}}/build*/CMakeFiles/CMakeOutput.log | |
| echo "CMAKE ERROR" && cat ${{runner.workspace}}/build*/CMakeFiles/CMakeError.log | |
| - name: FindLAPACK Default | |
| # Disable for | |
| # - BLIS-ILP64 b/c BLIS doesn't have a LAPACK linker and NETLIB is not tested for ILP64 | |
| # - MKL-ILP64 b/c the default is LP64 unless otherwise specified | |
| if: ${{ (matrix.linalg_lib != 'blis' && matrix.linalg_lib != 'intel-mkl') || matrix.int_interface != 'ilp64' }} | |
| run: | | |
| cmake -H${GITHUB_WORKSPACE}/examples/lapack/default \ | |
| -B${{runner.workspace}}/build-findlapack-default \ | |
| -DCMAKE_MODULE_PATH=${GITHUB_WORKSPACE} \ | |
| -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} \ | |
| -DLAPACK_THREAD_LAYER=${{matrix.thread}} | |
| .github/workflows/scripts/check_lapack_cmake_cache.sh \ | |
| ${{runner.workspace}}/build-findlapack-default \ | |
| ${{matrix.linalg_lib}} ${{matrix.thread}} ${{matrix.int_interface}} | |
| - name: FindLAPACK Integer Specific | |
| # Disable for BLIS-ILP64 b/c BLIS doesn't have a LAPACK linker and NETLIB is not tested for ILP64 | |
| if: ${{ matrix.linalg_lib != 'blis' || matrix.int_interface != 'ilp64' }} | |
| run: | | |
| cmake -H${GITHUB_WORKSPACE}/examples/lapack/${{matrix.int_interface}} \ | |
| -B${{runner.workspace}}/build-findlapack-${{matrix.int_interface}} \ | |
| -DCMAKE_MODULE_PATH=${GITHUB_WORKSPACE} \ | |
| -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} \ | |
| -DLAPACK_THREAD_LAYER=${{matrix.thread}} | |
| .github/workflows/scripts/check_lapack_cmake_cache.sh \ | |
| ${{runner.workspace}}/build-findlapack-${{matrix.int_interface}} \ | |
| ${{matrix.linalg_lib}} ${{matrix.thread}} ${{matrix.int_interface}} | |
| - name: FindLAPACK Static Linkage | |
| if: ${{ matrix.linalg_lib != 'blis' || matrix.int_interface != 'ilp64' }} | |
| run: | | |
| cmake -H${GITHUB_WORKSPACE}/examples/lapack/${{matrix.int_interface}} \ | |
| -B${{runner.workspace}}/build-findlapack-static \ | |
| -DCMAKE_MODULE_PATH=${GITHUB_WORKSPACE} \ | |
| -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} \ | |
| -DLAPACK_THREAD_LAYER=${{matrix.thread}} \ | |
| -DLAPACK_PREFERS_STATIC=ON | |
| .github/workflows/scripts/check_lapack_cmake_cache.sh \ | |
| ${{runner.workspace}}/build-findlapack-static \ | |
| ${{matrix.linalg_lib}} ${{matrix.thread}} ${{matrix.int_interface}} | |
| - name: FindScaLAPACK Default | |
| # Disable for | |
| # - Non-MKL-ILP64 b/c NETLIB can't handle ILP64 consist | |
| # - MKL-ILP64 b/c the default is LP64 unless otherwise specified | |
| if: ${{ (matrix.linalg_lib == 'intel-mkl' && matrix.int_interface == 'lp64') || matrix.int_interface == 'lp64' }} | |
| run: | | |
| cmake -H${GITHUB_WORKSPACE}/examples/scalapack/default \ | |
| -B${{runner.workspace}}/build-findscalapack-default \ | |
| -DCMAKE_MODULE_PATH=${GITHUB_WORKSPACE} \ | |
| -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} \ | |
| -DBLAS_THREAD_LAYER=${{matrix.thread}} | |
| .github/workflows/scripts/check_scalapack_cmake_cache.sh \ | |
| ${{runner.workspace}}/build-findscalapack-default \ | |
| ${{matrix.linalg_lib}} ${{matrix.thread}} ${{matrix.int_interface}} ${{matrix.mpi_dist}} | |
| - name: FindScaLAPACK Integer Specific | |
| # Disable for | |
| # - Non-MKL-ILP64 b/c NETLIB can't handle ILP64 consist | |
| if: ${{ matrix.linalg_lib == 'intel-mkl' || matrix.int_interface == 'lp64' }} | |
| run: | | |
| cmake -H${GITHUB_WORKSPACE}/examples/scalapack/${{matrix.int_interface}} \ | |
| -B${{runner.workspace}}/build-findscalapack-${{matrix.int_interface}} \ | |
| -DCMAKE_MODULE_PATH=${GITHUB_WORKSPACE} \ | |
| -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} \ | |
| -DBLAS_THREAD_LAYER=${{matrix.thread}} | |
| .github/workflows/scripts/check_scalapack_cmake_cache.sh \ | |
| ${{runner.workspace}}/build-findscalapack-${{matrix.int_interface}} \ | |
| ${{matrix.linalg_lib}} ${{matrix.thread}} ${{matrix.int_interface}} ${{matrix.mpi_dist}} | |
| check-kitware-compatability: | |
| runs-on: ubuntu-22.04 | |
| env: | |
| MKLROOT: /opt/intel/oneapi/mkl/latest | |
| CMAKE_PREFIX_PATH: '/home/software/install/blis-lp64-sequential;/home/software/install/netlib-lp64-sequential' | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Ubuntu Setup | |
| run: | | |
| sudo apt-get -yq update && sudo apt-get install make wget curl libomp5 | |
| sudo make -C .github/workflows/linalg install/main | |
| sudo make -C .github/workflows/linalg install/cmake | |
| sudo apt-get clean | |
| sudo make -C .github/workflows/linalg apt-add-repository/intel-mkl | |
| - name: Build Linalg | |
| run: | | |
| sudo make -C .github/workflows/linalg download/intel-mkl | |
| sudo make -C .github/workflows/linalg install/intel-mkl | |
| sudo make -C .github/workflows/linalg download/blis | |
| sudo make -C .github/workflows/linalg install/blis/lp64-sequential | |
| - name: Check BLA_STATIC | |
| run: | | |
| cmake -H${GITHUB_WORKSPACE}/examples/blas/lp64 \ | |
| -B${{runner.workspace}}/check-bla-static \ | |
| -DCMAKE_MODULE_PATH=${GITHUB_WORKSPACE} \ | |
| -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} \ | |
| -DBLAS_THREAD_LAYER=sequential \ | |
| -DBLA_STATIC=ON | |
| .github/workflows/scripts/check_blas_cmake_cache.sh \ | |
| ${{runner.workspace}}/check-bla-static \ | |
| intel-mkl sequential lp64 | |
| - name: Check BLA_VENDOR | |
| run: | | |
| cmake -H${GITHUB_WORKSPACE}/examples/blas/lp64 \ | |
| -B${{runner.workspace}}/check-bla-vendor \ | |
| -DCMAKE_MODULE_PATH=${GITHUB_WORKSPACE} \ | |
| -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} \ | |
| -DBLAS_THREAD_LAYER=sequential \ | |
| -DBLA_VENDOR="BLIS" | |
| .github/workflows/scripts/check_blas_cmake_cache.sh \ | |
| ${{runner.workspace}}/check-bla-vendor \ | |
| blis sequential lp64 |