add portalocker too avoid errors when several processes try to write … #139
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name: Run detailed tests | |
on: | |
push: | |
paths-ignore: | |
- '**.md' | |
jobs: | |
run-tests: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: ["3.10"] # save action minutes; not relevant: for open source unlimited minutes | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{matrix.python-version}} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{matrix.python-version}} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install pytest Cython | |
pip install torch==2.0.0 -f https://download.pytorch.org/whl/cpu | |
pip install . | |
- name: Run test script | |
run: ./tests/tests.sh ${{ secrets.TOTALSEGMENTATOR_LICENSE }} | |
shell: bash | |
# upload-dockerhub: | |
# runs-on: ubuntu-latest | |
# # needs: run-tests | |
# # if: success() && github.ref == 'refs/heads/master' | |
# strategy: | |
# matrix: | |
# python-version: ["3.8"] | |
# steps: | |
# - uses: actions/checkout@v4 | |
# - name: Check disk space | |
# run: df -h | |
# - name: Login to Docker Hub | |
# uses: docker/login-action@v1 | |
# with: | |
# username: ${{ secrets.DOCKER_HUB_USERNAME }} | |
# password: ${{ secrets.DOCKER_HUB_ACCESS_TOKEN }} | |
# - name: Set up Docker Buildx | |
# uses: docker/setup-buildx-action@v1 | |
# - name: Build and push | |
# uses: docker/build-push-action@v2 | |
# with: | |
# context: . | |
# file: ./Dockerfile | |
# push: true | |
# tags: ${{ secrets.DOCKER_HUB_USERNAME }}/totalsegmentator_container:master |