VT-23. Update files with prettier

.copier-answers.yml

@@ -11,4 +11,3 @@ project_short_description: A JupyterLab extension.
 python_name: tvb_ext_ontology
 repository: https://github.com/the-virtual-brain/tvb-ext-ontology
 test: true
-

.github/workflows/build.yml

@@ -15,83 +15,83 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-    - name: Checkout
-      uses: actions/checkout@v4
-
-    - name: Base Setup
-      uses: jupyterlab/maintainer-tools/.github/actions/base-setup@v1
-
-    - name: Install dependencies
-      run: python -m pip install -U "jupyterlab>=4.0.0,<5"
-
-    - name: Lint the extension
-      run: |
-        set -eux
-        jlpm
-        jlpm run lint:check
-
-    - name: Test the extension
-      run: |
-        set -eux
-        jlpm run test
-
-    - name: Build the extension
-      run: |
-        set -eux
-        python -m pip install .[test]
-
-        pytest -vv -r ap --cov tvb_ext_ontology
-        jupyter server extension list
-        jupyter server extension list 2>&1 | grep -ie "tvb_ext_ontology.*OK"
-
-        jupyter labextension list
-        jupyter labextension list 2>&1 | grep -ie "tvb-ext-ontology.*OK"
-        python -m jupyterlab.browser_check
-
-    - name: Package the extension
-      run: |
-        set -eux
-
-        pip install build
-        python -m build
-        pip uninstall -y "tvb_ext_ontology" jupyterlab
-
-    - name: Upload extension packages
-      uses: actions/upload-artifact@v4
-      with:
-        name: extension-artifacts
-        path: dist/tvb_ext_ontology*
-        if-no-files-found: error
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Base Setup
+        uses: jupyterlab/maintainer-tools/.github/actions/base-setup@v1
+
+      - name: Install dependencies
+        run: python -m pip install -U "jupyterlab>=4.0.0,<5"
+
+      - name: Lint the extension
+        run: |
+          set -eux
+          jlpm
+          jlpm run lint:check
+
+      - name: Test the extension
+        run: |
+          set -eux
+          jlpm run test
+
+      - name: Build the extension
+        run: |
+          set -eux
+          python -m pip install .[test]
+
+          pytest -vv -r ap --cov tvb_ext_ontology
+          jupyter server extension list
+          jupyter server extension list 2>&1 | grep -ie "tvb_ext_ontology.*OK"
+
+          jupyter labextension list
+          jupyter labextension list 2>&1 | grep -ie "tvb-ext-ontology.*OK"
+          python -m jupyterlab.browser_check
+
+      - name: Package the extension
+        run: |
+          set -eux
+
+          pip install build
+          python -m build
+          pip uninstall -y "tvb_ext_ontology" jupyterlab
+
+      - name: Upload extension packages
+        uses: actions/upload-artifact@v4
+        with:
+          name: extension-artifacts
+          path: dist/tvb_ext_ontology*
+          if-no-files-found: error
 
   test_isolated:
     needs: build
     runs-on: ubuntu-latest
 
     steps:
-    - name: Install Python
-      uses: actions/setup-python@v5
-      with:
-        python-version: '3.9'
-        architecture: 'x64'
-    - uses: actions/download-artifact@v4
-      with:
-        name: extension-artifacts
-    - name: Install and Test
-      run: |
-        set -eux
-        # Remove NodeJS, twice to take care of system and locally installed node versions.
-        sudo rm -rf $(which node)
-        sudo rm -rf $(which node)
-
-        pip install "jupyterlab>=4.0.0,<5" tvb_ext_ontology*.whl
-
-
-        jupyter server extension list
-        jupyter server extension list 2>&1 | grep -ie "tvb_ext_ontology.*OK"
-
-        jupyter labextension list
-        jupyter labextension list 2>&1 | grep -ie "tvb-ext-ontology.*OK"
-        python -m jupyterlab.browser_check --no-browser-test
+      - name: Install Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: '3.9'
+          architecture: 'x64'
+      - uses: actions/download-artifact@v4
+        with:
+          name: extension-artifacts
+      - name: Install and Test
+        run: |
+          set -eux
+          # Remove NodeJS, twice to take care of system and locally installed node versions.
+          sudo rm -rf $(which node)
+          sudo rm -rf $(which node)
+
+          pip install "jupyterlab>=4.0.0,<5" tvb_ext_ontology*.whl
+
+
+          jupyter server extension list
+          jupyter server extension list 2>&1 | grep -ie "tvb_ext_ontology.*OK"
+
+          jupyter labextension list
+          jupyter labextension list 2>&1 | grep -ie "tvb-ext-ontology.*OK"
+          python -m jupyterlab.browser_check --no-browser-test
 
   integration-tests:
     name: Integration tests
@@ -102,53 +102,53 @@ jobs:
       PLAYWRIGHT_BROWSERS_PATH: ${{ github.workspace }}/pw-browsers
 
     steps:
-    - name: Checkout
-      uses: actions/checkout@v4
-
-    - name: Base Setup
-      uses: jupyterlab/maintainer-tools/.github/actions/base-setup@v1
-
-    - name: Download extension package
-      uses: actions/download-artifact@v4
-      with:
-        name: extension-artifacts
-
-    - name: Install the extension
-      run: |
-        set -eux
-        python -m pip install "jupyterlab>=4.0.0,<5" tvb_ext_ontology*.whl
-
-    - name: Install dependencies
-      working-directory: ui-tests
-      env:
-        YARN_ENABLE_IMMUTABLE_INSTALLS: 0
-        PLAYWRIGHT_SKIP_BROWSER_DOWNLOAD: 1
-      run: jlpm install
-
-    - name: Set up browser cache
-      uses: actions/cache@v4
-      with:
-        path: |
-          ${{ github.workspace }}/pw-browsers
-        key: ${{ runner.os }}-${{ hashFiles('ui-tests/yarn.lock') }}
-
-    - name: Install browser
-      run: jlpm playwright install chromium
-      working-directory: ui-tests
-
-    - name: Execute integration tests
-      working-directory: ui-tests
-      run: |
-        jlpm playwright test
-
-    - name: Upload Playwright Test report
-      if: always()
-      uses: actions/upload-artifact@v4
-      with:
-        name: tvb_ext_ontology-playwright-tests
-        path: |
-          ui-tests/test-results
-          ui-tests/playwright-report
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Base Setup
+        uses: jupyterlab/maintainer-tools/.github/actions/base-setup@v1
+
+      - name: Download extension package
+        uses: actions/download-artifact@v4
+        with:
+          name: extension-artifacts
+
+      - name: Install the extension
+        run: |
+          set -eux
+          python -m pip install "jupyterlab>=4.0.0,<5" tvb_ext_ontology*.whl
+
+      - name: Install dependencies
+        working-directory: ui-tests
+        env:
+          YARN_ENABLE_IMMUTABLE_INSTALLS: 0
+          PLAYWRIGHT_SKIP_BROWSER_DOWNLOAD: 1
+        run: jlpm install
+
+      - name: Set up browser cache
+        uses: actions/cache@v4
+        with:
+          path: |
+            ${{ github.workspace }}/pw-browsers
+          key: ${{ runner.os }}-${{ hashFiles('ui-tests/yarn.lock') }}
+
+      - name: Install browser
+        run: jlpm playwright install chromium
+        working-directory: ui-tests
+
+      - name: Execute integration tests
+        working-directory: ui-tests
+        run: |
+          jlpm playwright test
+
+      - name: Upload Playwright Test report
+        if: always()
+        uses: actions/upload-artifact@v4
+        with:
+          name: tvb_ext_ontology-playwright-tests
+          path: |
+            ui-tests/test-results
+            ui-tests/playwright-report
 
   check_links:
     name: Check Links

.github/workflows/check-release.yml

@@ -1,9 +1,9 @@
 name: Check Release
 on:
   push:
-    branches: ["main"]
+    branches: ['main']
   pull_request:
-    branches: ["*"]
+    branches: ['*']
 
 concurrency:
   group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
@@ -20,7 +20,6 @@ jobs:
       - name: Check Release
         uses: jupyter-server/jupyter_releaser/.github/actions/check-release@v2
         with:
-
           token: ${{ secrets.GITHUB_TOKEN }}
 
       - name: Upload Distributions

.github/workflows/prep-release.yml

@@ -1,26 +1,26 @@
-name: "Step 1: Prep Release"
+name: 'Step 1: Prep Release'
 on:
   workflow_dispatch:
     inputs:
       version_spec:
-        description: "New Version Specifier"
-        default: "next"
+        description: 'New Version Specifier'
+        default: 'next'
         required: false
       branch:
-        description: "The branch to target"
+        description: 'The branch to target'
         required: false
       post_version_spec:
-        description: "Post Version Specifier"
+        description: 'Post Version Specifier'
         required: false
       # silent:
       #   description: "Set a placeholder in the changelog and don't publish the release."
       #   required: false
       #   type: boolean
       since:
-        description: "Use PRs with activity since this date or git reference"
+        description: 'Use PRs with activity since this date or git reference'
         required: false
       since_last_stable:
-        description: "Use PRs with activity since the last stable git tag"
+        description: 'Use PRs with activity since the last stable git tag'
         required: false
         type: boolean
 jobs:
@@ -43,6 +43,6 @@ jobs:
           since: ${{ github.event.inputs.since }}
           since_last_stable: ${{ github.event.inputs.since_last_stable }}
 
-      - name: "** Next Step **"
+      - name: '** Next Step **'
         run: |
           echo "Optional): Review Draft Release: ${{ steps.prep-release.outputs.release_url }}"

.github/workflows/publish-release.yml

@@ -1,15 +1,15 @@
-name: "Step 2: Publish Release"
+name: 'Step 2: Publish Release'
 on:
   workflow_dispatch:
     inputs:
       branch:
-        description: "The target branch"
+        description: 'The target branch'
         required: false
       release_url:
-        description: "The URL of the draft GitHub release"
+        description: 'The URL of the draft GitHub release'
         required: false
       steps_to_skip:
-        description: "Comma separated list of steps to skip"
+        description: 'Comma separated list of steps to skip'
         required: false
 
 jobs:
@@ -45,13 +45,13 @@ jobs:
           token: ${{ steps.app-token.outputs.token }}
           release_url: ${{ steps.populate-release.outputs.release_url }}
 
-      - name: "** Next Step **"
+      - name: '** Next Step **'
         if: ${{ success() }}
         run: |
           echo "Verify the final release"
           echo ${{ steps.finalize-release.outputs.release_url }}
 
-      - name: "** Failure Message **"
+      - name: '** Failure Message **'
         if: ${{ failure() }}
         run: |
           echo "Failed to Publish the Draft Release Url:"

.github/workflows/update-integration-tests.yml

@@ -17,7 +17,6 @@ jobs:
         github.event.issue.author_association == 'MEMBER'
       ) && github.event.issue.pull_request && contains(github.event.comment.body, 'please update snapshots')
     runs-on: ubuntu-latest
-
     steps:
       - name: React to the triggering comment
         run: |

package.json

@@ -59,6 +59,7 @@
         "@jupyterlab/application": "^4.2.4",
         "@jupyterlab/apputils": "^4.3.4",
         "@jupyterlab/coreutils": "^6.0.0",
+        "@jupyterlab/galata": "^5.2.4",
         "@jupyterlab/launcher": "^4.2.4",
         "@jupyterlab/services": "^7.0.0",
         "@lumino/widgets": "^2.4.0"

ui-tests/tests/tvb_ext_ontology.spec.ts

@@ -16,6 +16,8 @@ test('should emit an activation console message', async ({ page }) => {
   await page.goto();
 
   expect(
-    logs.filter(s => s === 'JupyterLab extension tvb-ext-ontology is activated!')
+    logs.filter(
+      s => s === 'JupyterLab extension tvb-ext-ontology is activated!'
+    )
   ).toHaveLength(1);
 });