fix dictPath

uzh · May 31, 2022 · 33802ae · 33802ae
1 parent 88d032c
commit 33802ae
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/R/app-countSpacer.R b/R/app-countSpacer.R
@@ -12,7 +12,7 @@ ezMethodCountSpacer = function(input=NA, output=NA, param=NA){
 
   sampleName = input$getNames()
   setwdNew(sampleName)
-  param[['dictPath']] = list.files(file.path('/srv/GT/databases/GEML/sgRNA_Libs/',param[['dictPath']]), pattern = 'csv', full.names = TRUE)
+  param[['dictPath']] = list.files(file.path('/srv/GT/databases/GEML/sgRNA_Libs/',param[['dictPath']]), pattern = 'final.csv', full.names = TRUE)
   dict = ezRead.table(param[['dictPath']], header = FALSE, sep = ',', row.names = NULL)
   colnames(dict) = c('TargetID', 'Sequence', 'GeneSymbol', 'isControl')
   dict[['ID']] = paste(dict$TargetID, dict$Sequence, sep = '-')