chore: release

htsget-actix/CHANGELOG.md

@@ -6,6 +6,11 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased]
 
+## [0.2.1](https://github.com/umccr/htsget-rs/compare/htsget-actix-v0.2.0...htsget-actix-v0.2.1) - 2023-05-04
+
+### Other
+- updated the following local packages: htsget-config, htsget-search
+
 ## [0.2.0](https://github.com/umccr/htsget-rs/compare/htsget-actix-v0.1.4...htsget-actix-v0.2.0) - 2023-04-28
 
 ### Added

htsget-actix/Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "htsget-actix"
-version = "0.2.0"
+version = "0.2.1"
 rust-version = "1.64"
 authors = ["Daniel del Castillo de la Rosa <[email protected]>", "Marko Malenic <[email protected]>"]
 edition = "2021"
@@ -20,10 +20,10 @@ actix-cors = "0.6"
 serde = { version = "1.0", features = ["derive"] }
 serde_json = "1.0"
 futures-util = { version = "0.3" }
-htsget-http = { version = "0.2.0", path = "../htsget-http", default-features = false }
-htsget-search = { version = "0.2.0", path = "../htsget-search", default-features = false }
-htsget-config = { version = "0.2.0", path = "../htsget-config", default-features = false }
-htsget-test = { version = "0.2.0", path = "../htsget-test", features = ["server-tests", "cors-tests"], default-features = false }
+htsget-http = { version = "0.2.1", path = "../htsget-http", default-features = false }
+htsget-search = { version = "0.3.0", path = "../htsget-search", default-features = false }
+htsget-config = { version = "0.3.0", path = "../htsget-config", default-features = false }
+htsget-test = { version = "0.2.1", path = "../htsget-test", features = ["server-tests", "cors-tests"], default-features = false }
 futures = { version = "0.3" }
 tokio = { version = "1.25", features = ["macros", "rt-multi-thread"] }
 

htsget-config/CHANGELOG.md

@@ -6,6 +6,104 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased]
 
+## [0.3.0](https://github.com/umccr/htsget-rs/compare/htsget-config-v0.2.0...htsget-config-v0.3.0) - 2023-05-04
+
+### Added
+- *(storage)* Add support for custom S3 endpoints (i.e: Minio)
+- use serve_at in data server rather than a constant
+- *(config)* set `Local` resolvers from data server config after parsing the `Config`
+- *(config)* add automatic config inference for local and s3 storage, and rearrange modules
+- [**breaking**] simplify storage config by allowing untagged enum representation
+
+### Fixed
+- *(release)* Bump all crates to 0.1.2 as explored in https://github.com/MarcoIeni/release-plz/issues/507#issuecomment-1422187766
+
+### Other
+- Merge pull request #171 from umccr/configurable_s3_endpoint
+- *(config)* fix typo
+- *(config)* rename test
+- *(config)* add tests for resolving responses
+- *(config)* fix incorrectly using resolved id when searching for regex capture groups
+- a few style changes, changed default resolver
+- *(config)* add tests for default tagged storage type
+- *(config)* document new features and how to use them
+- [**breaking**] rename `HttpTicketFormatter` and remove `UrlFormatter` implementation for it
+- [**breaking**] move htsget structs to config, and resolve storage type in config
+- *(config)* leverage tagged enum types to allow selecting storage type without manually specifying config values
+- manually bump crate versions to 0.1.4
+- bump crate versions to 0.1.3 manually
+- [**breaking**] move CertificateKeyPair to config to simplify data server logic
+- release
+- Downgrade release after fixing cargo publish circular dep issues as discussed in https://github.com/MarcoIeni/release-plz/issues/507#issuecomment-1420254400
+- Update cargo files (#152)
+- release (#148)
+- Set MSRV on all sub-crates (#146)
+- Better CI (#98)
+- add missing environment variable options
+- remove unnecessary default column for environment variables, surround environment variables in backticks.
+- reword resolvers description
+- clarify how the resolvers work
+- reword usage string
+- remove duplicate config module
+- Merge branch 'main' of https://github.com/umccr/htsget-rs into more-flexible-config-rename
+- fix feature flag compile errors
+- add test for long resolvers from environment variable config
+- fix broken data server optional by introducing boolean flag to enable data server
+- add documentation for reworked config
+- flatten data server config
+- clippy and fmt
+- update config file with default values, add option to print a default config
+- allow specifying tags, reference names, fields with an 'All' value
+- remove setters, add constructors, add documentation.
+- reduce some options for cors, remove repeated code when configuring cors
+- fix tests affected by config, change some default values and move around config options
+- remove custom deserializer for None option and instead use custom enum
+- fix logic involving allowed attributes
+- apply changes to other crates from reworked config
+- update getter return types
+- deserialize empty string as None value
+- add cors tests and environment variable tests
+- remove public fields, add public getters
+- allow configuring multiple data servers
+- add expose headers cors option
+- move cors config to separate file
+- add case insensitive aliases to enum variants
+- add allow origins, and separate out tagged and untagged enum variants
+- add generic allow type configuration option for allow headers and allow methods
+- add cors max age option
+- add cors allow header types for cors config
+- add CorsConfig shared struct
+- add UrlResolver, separate data server config from resolver
+- fix errors relating to new config
+- use figment instead of config because it is simpler to set defaults
+- move config into separate module
+- add tests for checking for contained value in interval
+- implement query matcher logic
+- move fields, tags, no tags, query, and interval to config
+- add separate config for local server and s3 storage
+- add config file from command line or env option
+- swap out envy for config dependency
+- Add documentation for cors
+- Implement configurable origin for cors
+- Add cors allow credentials option to data server config
+- Move data server config to separate struct
+- Move server config into separate struct
+- Implement cors for htsget-http-actix.
+- Add more spans and tracing calls.
+- Move tracing setup to config.
+- Bump dependencies, fix clippy warnings.
+- Improve errors so that they are more informative.
+- Update README instructions.
+- Add ticker server addr test.
+- Clean up code, format, update dependencies.
+- Implement non-tls ticket server alongside tls ticket server.
+- Fix localstorage path (#86)
+- Fix tests and errors (#83)
+- Deploy htsget-http-lambda. (#81)
+- Enable choosing between storage types. (#80)
+- Remove file from localstorage (#79)
+- Htsget http lambda (#76)
+
 ## [0.2.0](https://github.com/umccr/htsget-rs/compare/htsget-config-v0.1.4...htsget-config-v0.2.0) - 2023-04-28
 
 ### Added

htsget-config/Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "htsget-config"
-version = "0.2.0"
+version = "0.3.0"
 rust-version = "1.64"
 authors = ["Daniel del Castillo de la Rosa <[email protected]>", "Marko Malenic <[email protected]>"]
 edition = "2021"

htsget-http/CHANGELOG.md

@@ -6,6 +6,11 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased]
 
+## [0.2.1](https://github.com/umccr/htsget-rs/compare/htsget-http-v0.2.0...htsget-http-v0.2.1) - 2023-05-04
+
+### Other
+- updated the following local packages: htsget-config, htsget-search
+
 ## [0.2.0](https://github.com/umccr/htsget-rs/compare/htsget-http-v0.1.4...htsget-http-v0.2.0) - 2023-04-28
 
 ### Added

htsget-http/Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "htsget-http"
-version = "0.2.0"
+version = "0.2.1"
 rust-version = "1.64"
 authors = ["Daniel del Castillo de la Rosa <[email protected]>", "Marko Malenic <[email protected]>"]
 edition = "2021"
@@ -18,9 +18,9 @@ default = ["s3-storage"]
 thiserror = "1.0"
 serde = { version = "1.0", features = ["derive"] }
 http = "0.2"
-htsget-search = { version = "0.2.0", path = "../htsget-search", default-features = false }
-htsget-config = { version = "0.2.0", path = "../htsget-config", default-features = false }
-htsget-test = { version = "0.2.0", path = "../htsget-test", default-features = false }
+htsget-search = { version = "0.3.0", path = "../htsget-search", default-features = false }
+htsget-config = { version = "0.3.0", path = "../htsget-config", default-features = false }
+htsget-test = { version = "0.2.1", path = "../htsget-test", default-features = false }
 futures = { version = "0.3" }
 tokio = { version = "1.25", features = ["macros", "rt-multi-thread"] }
 tracing = "0.1"

htsget-lambda/CHANGELOG.md

@@ -6,6 +6,11 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased]
 
+## [0.2.1](https://github.com/umccr/htsget-rs/compare/htsget-lambda-v0.2.0...htsget-lambda-v0.2.1) - 2023-05-04
+
+### Other
+- updated the following local packages: htsget-config, htsget-search
+
 ## [0.2.0](https://github.com/umccr/htsget-rs/compare/htsget-lambda-v0.1.4...htsget-lambda-v0.2.0) - 2023-04-28
 
 ### Added

htsget-lambda/Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "htsget-lambda"
-version = "0.2.0"
+version = "0.2.1"
 rust-version = "1.64"
 authors = ["Marko Malenic <[email protected]>", "Roman Valls Guimera <[email protected]>"]
 edition = "2021"
@@ -19,10 +19,10 @@ tokio = { version = "1.25", features = ["macros", "rt-multi-thread"] }
 tower-http = { version = "0.3", features = ["cors"] }
 lambda_http = { version = "0.7" }
 lambda_runtime = { version = "0.7" }
-htsget-config = { version = "0.2.0", path = "../htsget-config", default-features = false }
-htsget-search = { version = "0.2.0", path = "../htsget-search", default-features = false }
-htsget-http = { version = "0.2.0", path = "../htsget-http", default-features = false }
-htsget-test = { version = "0.2.0", path = "../htsget-test", features = ["server-tests", "cors-tests"], default-features = false }
+htsget-config = { version = "0.3.0", path = "../htsget-config", default-features = false }
+htsget-search = { version = "0.3.0", path = "../htsget-search", default-features = false }
+htsget-http = { version = "0.2.1", path = "../htsget-http", default-features = false }
+htsget-test = { version = "0.2.1", path = "../htsget-test", features = ["server-tests", "cors-tests"], default-features = false }
 serde = { version = "1.0" }
 serde_json = "1.0"
 mime = "0.3"