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Fix typos in supp README.md
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hmsch authored Dec 19, 2024
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# Supplementary Data

This folder contains gene sets selected by PORCELAN, GO-term analysis results,
and lineage trees with edge weight optimized by PORCELAN.
and lineage trees with edge weights optimized by PORCELAN.
For _C. elegans_ we analyzed the AB and non-AB lineage separately and ran PORCELAN
a second time after removing the top weighted genes from the first run to
select a 2nd gene set for each case. For the mouse embryo samples and a tumor
sample we ran PORCELAN on 5 different random subsets (distinguishable by the
random seeds in the file names).

* `gene_sets_selected` contains the gene setes selected by PORCELAN.
* `gene_sets_selected` contains the gene sets selected by PORCELAN.
* `go_term_analysis` contains adjusted p-values for GO-terms from "GO_Biological_Process_2023"
for mouse tumor and embryo samples and "GO_Biological_Process_2018" for _C. elegans_ for
the gene sets selected by PORCELAN.
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