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tiagoams committed May 16, 2024
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<ul class="md-nav__list">

<li class="md-nav__item">
<a href="#cefas-users" class="md-nav__link">
Cefas Users
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1.1. Cefas Users
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<a href="#students-or-uea-staff" class="md-nav__link">
Students or UEA Staff
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1.2. Students or UEA Staff
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<a href="#uea-hpc-ada" class="md-nav__link">
UEA HPC (Ada)
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1.3 UEA HPC (Ada)
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<ul class="md-nav__list">

<li class="md-nav__item">
<a href="#cefas-users" class="md-nav__link">
Cefas Users
<a href="#11-cefas-users" class="md-nav__link">
1.1. Cefas Users
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<a href="#students-or-uea-staff" class="md-nav__link">
Students or UEA Staff
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1.2. Students or UEA Staff
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<a href="#uea-hpc-ada" class="md-nav__link">
UEA HPC (Ada)
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1.3 UEA HPC (Ada)
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Expand Down Expand Up @@ -738,17 +738,16 @@ <h2 id="laptop-installation">Laptop Installation</h2>
<p>Feel free to contact <a href="mailto:[email protected]">Jenny at Cefas</a> or <a href="mailto:[email protected]">Eliza at UEA</a> if you have any problems with the installation (but better do an internet search first!)
Note: The course is designed in Python 3.9 but even if you have a different version installed, 3.9 will be installed when creating a conda environment in step 3 below.</p>
<h2 id="1-install-python-distribution">1. Install Python distribution</h2>
<h3 id="cefas-users">Cefas Users</h3>
<h3 id="11-cefas-users">1.1. Cefas Users</h3>
<p>You will neet to request in advance a temporary administrator password to make the installation. </p>
<p>As a government organisation we do not have free access to Anaconda, so please use the free alternative mambaforge. For those in academia, we also recommend this as a more lightweight (and often faster) python installation option! </p>
<p>1.1.a <a href="https://github.com/conda-forge/miniforge#mambaforge">Download Mambaforge for your OS</a> </p>
<p>1.2.a After downloading, follow the instructions as suggested <a href="https://github.com/conda-forge/miniforge#install">here</a></p>
<h3 id="students-or-uea-staff">Students or UEA Staff</h3>
<p>1.1.b. <a href="https://www.anaconda.com/download/">Download Anaconda with Python 3 for your OS</a>. </p>
<p>1.2.b. Install it following <a href="https://docs.anaconda.com/anaconda/install/">these instructions</a>. Be sure to select install "just me" when prompted.</p>
<h3 id="uea-hpc-ada">UEA HPC (Ada)</h3>
<p>Following the course, there are a number of modules available for use of python on Ada, using either mamba or anaconda. </p>
<p>However, for the purpose of this course, we recommend viewing the notebooks on your own machine. </p>
<p>1.1.1. <a href="https://github.com/conda-forge/miniforge#mambaforge">Download Mambaforge for your OS</a> </p>
<p>1.1.1. After downloading, follow the instructions as suggested <a href="https://github.com/conda-forge/miniforge#install">here</a></p>
<h3 id="12-students-or-uea-staff">1.2. Students or UEA Staff</h3>
<p>1.2.1. <a href="https://www.anaconda.com/download/">Download Anaconda with Python 3 for your OS</a>. </p>
<p>1.2.2. Install it following <a href="https://docs.anaconda.com/anaconda/install/">these instructions</a>. Be sure to select install "just me" when prompted.</p>
<h3 id="13-uea-hpc-ada">1.3 UEA HPC (Ada)</h3>
<p>If you already have an account on Ada, then it would be possible to run the Jupyter notebooks of the lessons by starting a session on <a href="https://adaood01.uea.ac.uk/">Ada OnDemand</a>. You can try to follow the instructions for laptops for copying and running the lessons, but we won't be able to provide specific support, and so the preferred method is to use your laptop or MyBinder. </p>
<h2 id="2-download-course-materials">2. Download course materials</h2>
<p>From the Friday before the course (28th of June) the material for the workshop can be downloaded as a <a href="https://github.com/ueapy/pythoncourse2024-materials/archive/main.zip">zip file</a> or can be cloned from our <a href="https://github.com/ueapy/pythoncourse2024-materials">GitHub repository</a>. </p>
<h3 id="option-1-download-zip-file-easier">Option 1: Download ZIP file (easier)</h3>
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