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1. coptr coptr Public

   Accurate and robust inference of microbial growth dynamics from metagenomic sequencing

   Python 18 5

2. dystruct dystruct Public

   Inference of population structure from time-series genotype data

   C++ 13 3

3. luminate luminate Public

   Denoising longitudinal microbiome data.

   Python 7 2

4. clv clv Public

   Compositional Lotka-Volterra

   Python 15 7