Code

Study listing#20

Code

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kamilsi merged 55 commits intodevelttscience/unbiased:develfrom feat/study-listttscience/unbiased:feat/study-listCopy head branch name to clipboardDec 20, 2023

+1,738-40

Commits

Commits on Nov 10, 2023

• implement simple randomization

  

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• add unit tests for simple rand

  

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Commits on Nov 13, 2023

• define several DB tables

  

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• implement stratum tables

  

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Commits on Nov 14, 2023

• implement triggers for constraint tables

  

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• add simple examples

  

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• clean code slightly

  

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• store and check patient stratum values

  

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• fix trigger code

  

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• add dbplyr to R (for DB tests)

  

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Commits on Nov 15, 2023

• simplify DB structure

  

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• add temporal extension

  

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• add metadata storage

  

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• add versioning and reorganize SQL

  

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• add method history after all

  

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• fix some details

  

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• add simple DB tests

  

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• change service name

  

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• give Postgres more time to start

  

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• use insistently instead

  

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• add package version test against DB

  

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• separate DB connection logic

  

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Commits on Nov 16, 2023

• test study table

  

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• Merge branch 'feat/simple' into feat/study-def

  

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• separate API and DB starts

  

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• mostly write DB insertions for study

  

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Commits on Nov 17, 2023

• create working study submit endpoint

  

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• assertions and docs for define_study

  

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• recompile package

  

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• fix setup skip

  

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• update NEWS

  

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• log args too

  

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• implement study list and details

  

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• document new functions

  

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• increase version

  

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• inject variables

  

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• return study ID upon insert

  

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• fix parameter added back

  

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• increment DB schema version

  

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Commits on Dec 11, 2023

• add tests for simple randomization: one-sample prop tests for two and more groups with equal and unequal ratio

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• correct number of patients

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Commits on Dec 13, 2023

• moved API to standard location, bumped up renv to R 4.2.3, removed "hello world", still WIP

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Commits on Dec 15, 2023

• removed dummy function

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• Merge pull request #17 from ttscience/feat/simple

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• Removed dependency on 7yo dockerfile, added our own; fixed API path in test setup

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• fixed dockerfile dependencies

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• bugfixed test startup

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• Fixed R version, API launch command

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• removed redundant test

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Commits on Dec 19, 2023

• added comments to SQL, added additional DB tests

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• bugfix

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• bugifx

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• bugfixed tests

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Commits on Dec 20, 2023

• Merge pull request #19 from ttscience/feat/study-def

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• resolved merge conflicts

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