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Merge pull request #2403 from benjeffery/0.5.1-1.1.0-release-prep
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Release prep
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benjeffery authored Jul 14, 2022
2 parents 8a69970 + 42190e1 commit f41eddc
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6 changes: 3 additions & 3 deletions c/CHANGELOG.rst
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--------------------
[1.1.0] - 2022-XX-XX
[1.0.1] - 2022-07-14
--------------------

**Features**
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nodes of each node in the tree. (:user:`GertjanBisschop`, :issue:`2274`, :pr:`2316`)

- Add ``edge`` to ``tsk_tree_t`` an array which contains the ``edge_id`` of the edge encoding
the relationship between the child node and its parent for each (child) node in the tree
the relationship between the child node and its parent for each (child) node in the tree.
(:user:`GertjanBisschop`, :issue:`2304`, :pr:`2340`)


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- Reduce the maximum number of rows in a table by 1. This removes edge cases so that a ``tsk_id_t`` can be
used to count the number of rows. (:user:`benjeffery`, :issue:`2336`, :pr:`2337`)

- Samples are now copied by ``tsk_variant_restricted_copy``. (:user:`benjeffery`, :issue:`2400`, :pr:`XXXX`)
- Samples are now copied by ``tsk_variant_restricted_copy``. (:user:`benjeffery`, :issue:`2400`, :pr:`2401`)


--------------------
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2 changes: 1 addition & 1 deletion c/VERSION.txt
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1.0.0
1.1.0
2 changes: 1 addition & 1 deletion c/tskit/core.h
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Expand Up @@ -138,7 +138,7 @@ sizes and types of externally visible structs.
The library minor version. Incremented when non-breaking backward-compatible changes
to the API or ABI are introduced, i.e., the addition of a new function.
*/
#define TSK_VERSION_MINOR 0
#define TSK_VERSION_MINOR 1
/**
The library patch version. Incremented when any changes not relevant to the
to the API or ABI are introduced, i.e., internal refactors of bugfixes.
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4 changes: 2 additions & 2 deletions python/CHANGELOG.rst
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--------------------
[0.5.1] - 2022-0X-XX
[0.5.1] - 2022-07-14
--------------------

**Fixes**

- Copies of a `Variant` object would cause a segfault when ``.samples`` was accessed.
(:user:`benjeffery`, :issue:`2400`, :pr:`XXXX`)
(:user:`benjeffery`, :issue:`2400`, :pr:`2401`)


**Changes**
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2 changes: 1 addition & 1 deletion python/tests/test_lowlevel.py
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Expand Up @@ -3718,7 +3718,7 @@ def test_kastore_version(self):

def test_tskit_version(self):
version = _tskit.get_tskit_version()
assert version == (1, 0, 0)
assert version == (1, 1, 0)

def test_tskit_version_file(self):
maj, min_, patch = _tskit.get_tskit_version()
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2 changes: 1 addition & 1 deletion python/tskit/_version.py
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# Definitive location for the version number.
# During development, should be x.y.z.devN
# For beta should be x.y.zbN
tskit_version = "0.5.1.dev0"
tskit_version = "0.5.1"

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