🐻 The open source cohort selection and analysis interface

Core components and documentation of the tranSMART platform. https://i2b2transmart.org/

tranSMART pipeline alternative to ETL, using Spring Batch

Docker scripts for Glowing Bear

🐍 Python client for tranSMART Glowing Bear

Core components and documentation of the tranSMART platform.

tranSMART Arborist ETL toolkit

Data science with tranSMART REST API in Python and R

TranSMART loader library for Python

TranSMART Arborist: Graphical tool for reshaping your data for the tranSMART data warehouse.

Scripts for converting CSR data to TranSMART

Export a subset of data from a TranSMART instance based on a query, and upload them to a different (empty) TranSMART instance using transmart-copy. Short for TranSMART hypercube dicer.

Android Client for TranSMART

ClaML ontology to TranSMART loader

Puppet module for TranSMART

A data showcase for displaying a summary of data in TranSMART.

Data extraction, transformation and loading pipeline for the Princess Maxima Center

Backend application for Glowing Bear UI, supporting user queries management, subscription and notification functionality

tranSMART-Vagrant Ubuntu 14.04