Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project
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Nov 29, 2024 - R
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direct-rna-sequencing
Here are 8 public repositories matching this topic...
Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files
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Apr 4, 2024 - R
An awesome Oxford Nanopore Pipeline for direct RNA-sequencing
bioinformatics quality-control pipeline singularity alternative-splicing-analysis transcriptomics oxford-nanopore rna-editing differential-expression-analysis snakemake-pipeline novel-transcripts rna-modifications direct-rna-sequencing known-transcripts polya-tail-length-estimation
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Feb 6, 2024 - Python
tool for long read transcriptome assembly
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Aug 24, 2023 - Jupyter Notebook
Transcriptome-wide analysis of mRNA adenylation status in yeast using nanopore sequencing - materials accompanying the methods chapter
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Jan 30, 2023 - TeX
Demo data repo for workflow or function test
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Jan 16, 2023
Nanopore based RNA-Seq pipeline for viral samples
influenza oxford-nanopore rna-seq-pipeline nanopore-sequencing covid-19 sars-cov-2 direct-rna-sequencing
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Apr 6, 2020
RNA Modification Detection using Nanopore Direct RNA Sequencing via improved Transformer
interpretability nanopore-sequencing multiple-instance-learning direct-rna-sequencing rna-modification modification-detection
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Dec 13, 2024 - Jupyter Notebook
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