Update blog contribution guide #62
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| on: | |
| push: | |
| branches: | |
| - master | |
| env: | |
| cache-version: v1 | |
| repo-name: tidyomics/tidyomicsBlog | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| jobs: | |
| job1: | |
| runs-on: ubuntu-latest | |
| container: bioconductor/bioconductor_docker:devel | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| submodules: true # Fetch Hugo themes (true OR recursive) | |
| fetch-depth: 0 # Fetch all history for .GitInfo and .Lastmod | |
| - name: Query dependencies and update old packages | |
| run: | | |
| BiocManager::install(ask=FALSE) | |
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
| shell: Rscript {0} | |
| - name: Cache R packages | |
| if: runner.os != 'Windows' | |
| uses: actions/cache@v1 | |
| with: | |
| path: /usr/local/lib/R/site-library | |
| key: ${{ env.cache-version }}-${{ runner.os }}-r-${{ hashFiles('.github/depends.Rds') }} | |
| restore-keys: ${{ env.cache-version }}-${{ runner.os }}-r- | |
| # This lets us augment with additional dependencies | |
| - name: Install system dependencies | |
| if: runner.os == 'Linux' | |
| env: | |
| RHUB_PLATFORM: linux-x86_64-ubuntu-gcc | |
| run: | | |
| sysreqs=$(Rscript -e 'cat("apt-get update -y && apt-get install -y", paste(gsub("apt-get install -y ", "", remotes::system_requirements("ubuntu", "20.04")), collapse = " "))') | |
| echo $sysreqs | |
| sudo -s eval "$sysreqs" | |
| - name: Setup Hugo | |
| uses: peaceiris/actions-hugo@v2 | |
| with: | |
| hugo-version: '0.79.1' | |
| # extended: true | |
| - name: Build | |
| run: | | |
| cd blog | |
| hugo --minify | |
| - name: Deploy | |
| uses: peaceiris/actions-gh-pages@v3 | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| publish_dir: ./blog/public | |
| BRANCH: gh-pages # The branch the action should deploy to. | |
| FOLDER: docs # Folder the action should deploy |